Gene Pmen_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0709 
Symbolfis 
ID5109039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp788027 
End bp788347 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content60% 
IMG OID640501922 
ProductDNA-binding protein Fis 
Protein accessionYP_001186209 
Protein GI146305744 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGA TGACAGAGAC CCTAGTGAGT GGAATTGCAC CCGTGAGTGA CAACACCAGC 
CTTAAACAGC ACCTGAATAC GCCGAGCGAA GAGGGCCAGA CCCTGCGCGG CGCCGTGGAG
AAGGCGCTGC ACAACTACTT CGCCCATCTC GAGGGCGCGG ACGTCACCGA CGTGTACAAC
CTGGTGCTCA CTGAAGTGGA AGCGCCGCTG CTGGAAACCG TCATGAACCA CGTGAAGGGT
AACCAGACCA AGGCCTCCGA GCTGCTCGGC CTGAACCGCG GCACGCTGCG CAAGAAGCTC
AAGCAGTACG ACCTGCTGTA A
 
Protein sequence
MTLMTETLVS GIAPVSDNTS LKQHLNTPSE EGQTLRGAVE KALHNYFAHL EGADVTDVYN 
LVLTEVEAPL LETVMNHVKG NQTKASELLG LNRGTLRKKL KQYDLL