Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0702 |
Symbol | |
ID | 5109032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 774767 |
End bp | 775489 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640501915 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001186202 |
Protein GI | 146305737 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.582572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGG TCAGCCCCGC CAGGCGTGGC AAGGAGCGCC CGGAGAATCT AGCCGAGCGC ATCTACGCCC AGCTCAAGGA CGACATCTTC GAGTTCCGCC TGCTGCCGGG CGACCGCTTT TCCGAAGGCG AGATCGCCGA GCGCATGGCC GCCAGCCGCA CGCCGGTGCG TCAGGCGCTG TATCGCCTGG AACGCGAGGG CTATCTGGAG GTGTATTTCC GCAGCGGCTG GCAGGTCAAG CCGTTCGATT TCGCCCACTT CGAGGAGCTC TACGAGGTGC GCATCGTCCT CGAACTGGAG GCGGTCAAGC GACTGTGCGA GCGCCCCGCT GGCGAGCTGC CGGAGGCCCT GGAACAGCTG CGTCGCACCT GGATGGTGCA ACCCGAGCAG CGTCTGCAGG ACGGCCGCGA AGTCTCGCGT CTGGACGAGC GTTTTCACTG CCAGCTGGTG GAAGCCGCCG GCAACCGCGA GATGGCCCGC CTGCACGCCG AAGTCAGCGA AAAGATCCGA ATTATCAGGC GCCTGGACTT CACCCAGGGG CCGCGCGTGG AACTCACCTA CGAGGAACAC GCCCGCATCC TCGGCGCGAT CCTGTCGCGT CGCTGCGAAG AGGCACAGCT ATTGCTGAAG ACCCACATAG AGGTCAGCAA GGCGGAAGTG CGCAAGATCA CCCTGCACAT GCTGCACAGC GCCCGCCAGC GGGCGCTGCC GGCGCAAGGG TGA
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Protein sequence | MQLVSPARRG KERPENLAER IYAQLKDDIF EFRLLPGDRF SEGEIAERMA ASRTPVRQAL YRLEREGYLE VYFRSGWQVK PFDFAHFEEL YEVRIVLELE AVKRLCERPA GELPEALEQL RRTWMVQPEQ RLQDGREVSR LDERFHCQLV EAAGNREMAR LHAEVSEKIR IIRRLDFTQG PRVELTYEEH ARILGAILSR RCEEAQLLLK THIEVSKAEV RKITLHMLHS ARQRALPAQG
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