Gene Pmen_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0702 
Symbol 
ID5109032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp774767 
End bp775489 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID640501915 
ProductGntR family transcriptional regulator 
Protein accessionYP_001186202 
Protein GI146305737 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.582572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGG TCAGCCCCGC CAGGCGTGGC AAGGAGCGCC CGGAGAATCT AGCCGAGCGC 
ATCTACGCCC AGCTCAAGGA CGACATCTTC GAGTTCCGCC TGCTGCCGGG CGACCGCTTT
TCCGAAGGCG AGATCGCCGA GCGCATGGCC GCCAGCCGCA CGCCGGTGCG TCAGGCGCTG
TATCGCCTGG AACGCGAGGG CTATCTGGAG GTGTATTTCC GCAGCGGCTG GCAGGTCAAG
CCGTTCGATT TCGCCCACTT CGAGGAGCTC TACGAGGTGC GCATCGTCCT CGAACTGGAG
GCGGTCAAGC GACTGTGCGA GCGCCCCGCT GGCGAGCTGC CGGAGGCCCT GGAACAGCTG
CGTCGCACCT GGATGGTGCA ACCCGAGCAG CGTCTGCAGG ACGGCCGCGA AGTCTCGCGT
CTGGACGAGC GTTTTCACTG CCAGCTGGTG GAAGCCGCCG GCAACCGCGA GATGGCCCGC
CTGCACGCCG AAGTCAGCGA AAAGATCCGA ATTATCAGGC GCCTGGACTT CACCCAGGGG
CCGCGCGTGG AACTCACCTA CGAGGAACAC GCCCGCATCC TCGGCGCGAT CCTGTCGCGT
CGCTGCGAAG AGGCACAGCT ATTGCTGAAG ACCCACATAG AGGTCAGCAA GGCGGAAGTG
CGCAAGATCA CCCTGCACAT GCTGCACAGC GCCCGCCAGC GGGCGCTGCC GGCGCAAGGG
TGA
 
Protein sequence
MQLVSPARRG KERPENLAER IYAQLKDDIF EFRLLPGDRF SEGEIAERMA ASRTPVRQAL 
YRLEREGYLE VYFRSGWQVK PFDFAHFEEL YEVRIVLELE AVKRLCERPA GELPEALEQL
RRTWMVQPEQ RLQDGREVSR LDERFHCQLV EAAGNREMAR LHAEVSEKIR IIRRLDFTQG
PRVELTYEEH ARILGAILSR RCEEAQLLLK THIEVSKAEV RKITLHMLHS ARQRALPAQG