| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0687 |
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| Symbol | |
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| ID | 5109017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 761069 |
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| End bp | 761836 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501900 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001186187 |
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| Protein GI | 146305722 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGGA AATGCATGGC CGGTGTTCTT GTGCTGTTCT GCTGCCTGAG CGCGGCGGCT
GCCGAGCTGA GGCTGTACAC CGAGGATTAC CGGCCGTTCA GCTATCTCGA AGAGGGGCGG
CCGAGCGGCA TGGCGGTGGC GGTAGTCGAA GAGCTGATCC GCCGTACCGG CGAGGCGGCG
CGCATCGAGC TGGTGCCCTG GACCCGCGGC TACCATCAGG TTCGGCAGCA GGCCGATACC
GCCCTGTTCT CTACCGTGCG CACGCCGGCG CGCGAGCCCC TGTTCCACTG GGTCGGGCCG
ATTGCCCGCG GCCATACGCG CTTCTACAGC CTCAAGGAGT CCGGCGTGCG CGTGGCCAAC
CTGGACGATG TGCGTCAGCT CGGCACCCTT GCCGTGCCCA AGCAGTGGTA CAGCTACGAG
CTGTTGCGCG AACAGCAGAT GGAGAATCTC TACGGAGTGC CGACCCCGCA GGACATGCTG
CGCATGTTCC GCCATGGCCG GGTCAAGCTG CTGCTCGCCA ACAACCTCAC CCTCGATGGC
ATGCTGGCCG AGCAGGGCAT GCACGCCGGG CAGTTGCAGG AACAGTTCGA CCTGATGCCC
AACGACTCCT ACATCGCCTT CTCGCGGCAG ACCGATCTCG AACGCGTGGC GCGTTGGCAG
CGCGCCCTGG ACGAGATGCG CCGGGACGGC AGCCTGGAGC GCATCTACCG GCAGTGGTTC
CCCAGCGCCG ATGACGAGGC GCTGGCCGAG CTGTTGCGTG TCGATTGA
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| Protein sequence | MIRKCMAGVL VLFCCLSAAA AELRLYTEDY RPFSYLEEGR PSGMAVAVVE ELIRRTGEAA
RIELVPWTRG YHQVRQQADT ALFSTVRTPA REPLFHWVGP IARGHTRFYS LKESGVRVAN
LDDVRQLGTL AVPKQWYSYE LLREQQMENL YGVPTPQDML RMFRHGRVKL LLANNLTLDG
MLAEQGMHAG QLQEQFDLMP NDSYIAFSRQ TDLERVARWQ RALDEMRRDG SLERIYRQWF
PSADDEALAE LLRVD
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