Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0628 |
Symbol | |
ID | 5109590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 694350 |
End bp | 694892 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640501839 |
Product | oligoribonuclease |
Protein accession | YP_001186128 |
Protein GI | 146305663 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.541205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAACC CCAACAACCT GATCTGGATC GACCTGGAGA TGACCGGCCT GGAGCCGGAG CGGGACGTGA TCATCGAAAT GGCCACCATC GTCACCGACA GCGAGCTGAA CGTGCTCGCC GAGGGGCCGG TGATCGCTAT CCACCAGAGC GACGAGACCC TGGCCGGTAT GGACGAGTGG AACACCCGCA CCCATGGCCA GAGCGGGCTG ACCCAGCGCG TGCGTGAGAG CCGCATCGAC ACGGCGACGG CCGAGGCGCA GACCATCGCC TTTCTCGAGC AGTGGGTACC GAAGGGCAAG TCGCCGATCT GTGGCAACAG CATCGGTCAG GATCGCCGCT TCCTCTACAA GTACATGCCG GCGCTGGAGG CCTACTTCCA CTACCGCTAC CTGGACGTCT CGACGCTGAA GATTCTCGCC GGCATGTGGG CGCCGCAGGT CAAGGACAGC TTCCAGAAGA CCGCGACCCA TCAGGCGCTG GACGATATCC GTGAGTCGAT TGCCGAGCTC AAGCACTATC GTCAGCATTT CCTGAAGGCG TAG
|
Protein sequence | MQNPNNLIWI DLEMTGLEPE RDVIIEMATI VTDSELNVLA EGPVIAIHQS DETLAGMDEW NTRTHGQSGL TQRVRESRID TATAEAQTIA FLEQWVPKGK SPICGNSIGQ DRRFLYKYMP ALEAYFHYRY LDVSTLKILA GMWAPQVKDS FQKTATHQAL DDIRESIAEL KHYRQHFLKA
|
| |