Gene Pmen_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0625 
SymbolmotB 
ID5109587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp691399 
End bp692388 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID640501836 
Productflagellar motor protein MotB 
Protein accessionYP_001186125 
Protein GI146305660 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.749766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA ATCAACCCAT CATCGTCAAG CGGGTCAAGA AGAACGCTGG CGGGCATCAT 
GGTGGTGCCT GGAAGATCGC CTTCGCCGAC TTCGCCACCG CCATGATGGC GTTCTTTCTG
GTCATGTGGC TGATGTCGTC GGCCACGCCG GAGCAGAAGA AGGCCATTTC CGGTTACTTC
CAAGACCCCA TCGGCTTCAC CGAGAGCGCC AGCCCGCACG CCATCGATCT GGGCGGCTCG
CCCACGCCGG CGCCCGACCG CACCCTCAAC CCGGAAATCC AGGACCTGAC CGAGAGTCGC
GACGTGGACA TCGACGCCGA CCAGGTCGAG AGCCTGGCCG ACAAGCTCGA GCGCGAGCGT
CTGGAGCTGG TGCTGCAGGA GCTGCAGAAC AAGGTCGAGG AAAACCCCGA GCTGCAGCGT
TTCAAGGATC AGATCCTGTT CGAGATCACC CAGGACGGCC TGCGCATCCA GATCGTGGAT
GCCGAGAACC GTCCGATGTT CGCCCTCGGC AGCGCCAACC TGCAGCCCTA CTTCGAAGAC
ATCCTGCTGG CCATGGCCGA CACCATTCGC GCGGTGCCGA ACAAGATCAG CATCAGCGGC
CATACCGATG CCAAGCCCTT CGTCGGGCGT GGCGATTTCG GCAACTGGGA ATTGTCAGCC
AACCGTGCCA ATGCGGCGCG GCGTGCGCTG ATCGCCGGCG GTTATGCCGA TGAGCAGGTG
GCGCGGGTGG TGGGCTACGC CTCCTCGGCG CTGTTCGATC GCAACGATCC CTTCAACCCG
GTCAATCGGC GCATCGATAT CGTGGTGCTG ACCAAGAAGG CGCAGCGTGC CATCGAGGGT
GAGCAAGGTG GCGAAGAGCC GCCCGCTCCG GCCGACGGCG CCGCACCGGG CGGCGCGGCG
AACGAACCGC TGCCGGCCGG CCAGGTGCGC GAGCGGCTGA ACATCTTCGA GGAAGGCGCC
CTGCAGTTCG ATCAGCTGGG CAATCAGTAA
 
Protein sequence
MENNQPIIVK RVKKNAGGHH GGAWKIAFAD FATAMMAFFL VMWLMSSATP EQKKAISGYF 
QDPIGFTESA SPHAIDLGGS PTPAPDRTLN PEIQDLTESR DVDIDADQVE SLADKLERER
LELVLQELQN KVEENPELQR FKDQILFEIT QDGLRIQIVD AENRPMFALG SANLQPYFED
ILLAMADTIR AVPNKISISG HTDAKPFVGR GDFGNWELSA NRANAARRAL IAGGYADEQV
ARVVGYASSA LFDRNDPFNP VNRRIDIVVL TKKAQRAIEG EQGGEEPPAP ADGAAPGGAA
NEPLPAGQVR ERLNIFEEGA LQFDQLGNQ