Gene Pmen_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0605 
Symbol 
ID5109567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp667385 
End bp667996 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID640501816 
Producthypothetical protein 
Protein accessionYP_001186105 
Protein GI146305640 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT CCATCCTCTA TATCCACGGC CTCAACAGCT CGCCGGCCTC GCACAAGGCC 
TGCCAGTTGA GCGGTGCCAT GACCCGCCTG GGCCTGGCGC AGCAGTTGCG CGTGCCGGCC
CTGCATCATC ATCCGCGCCA GGCCATGCTG CAGTTGCAGG CGCTGGTCGC CGAGCTTGGC
GCGCCGCTGC TGGTGGGCAG CTCCCTGGGC GGCTATTACG CCACCTACCT GGCCGAGCAG
CACGGGCTCA AGGCGTTGCT GATCAACCCC GCGGTGCGCC CGCACCTGCG CTTCGACGGC
TACCTGGGCC CGCAGAAGAA CTATTACAGC GACGAGACCT GGGACCTCAC CGAGGACCAC
ATCCACGCCC TGGCCGAACT GGAAGTGCCG CCGCCGAACG ACCCGGCGCG CTACCAGGTG
TGGCTGCAGA CCGGCGATGA AACCCTCGAC TATCGCGACG CCGAACGTTA CTACCGCGGC
TGCGCCCTGC GCATCCAGGC CGGTGGCGAC CATGGCTTCC AGGGCTTCGC CGAACGCCTG
CCGATACTCT TCGCTTTTGC CGGCATTAAC GCCACACTTT GGCGCGATAT CGACTTTTCC
GTATCCAATT GA
 
Protein sequence
MTASILYIHG LNSSPASHKA CQLSGAMTRL GLAQQLRVPA LHHHPRQAML QLQALVAELG 
APLLVGSSLG GYYATYLAEQ HGLKALLINP AVRPHLRFDG YLGPQKNYYS DETWDLTEDH
IHALAELEVP PPNDPARYQV WLQTGDETLD YRDAERYYRG CALRIQAGGD HGFQGFAERL
PILFAFAGIN ATLWRDIDFS VSN