Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0582 |
Symbol | |
ID | 5109545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 640382 |
End bp | 641179 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640501795 |
Product | lipopolysaccharide kinase |
Protein accession | YP_001186084 |
Protein GI | 146305619 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0422457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCG AACCCTTCAA GAGCCTGTGG GCGGGCCGCG ATGCCTTCGA GGCCGTCGAG GCGCTGCAGG GCCAGGTCTA CCGCGAGCTG GAAGGCCGCC GCACCCTGCG CACCGAAGTC GACGGCCGTG GCTACTTCGT CAAGATCCAC CGCGGCATCG GTTGGGGCGA GATCGCCAAG AACCTGCTCA CGGCCAAGGC CCCAGTGCTG GGCGCCGGGC AAGAGTGGCA GGCCATCGCC CGCCTGACCG AGGCCGGGGT GCCGACCATG ACCGCGGTAG CCTATGGCGA GCGCGGCGCC AATCCGGCCA GCCAGCACTC GTTCATCATC ACCGAGGAGC TGGCGCCGAC CGTCGACCTG GAGCAGCTCA GCCTGAACTG GGCGCAGCAG CCACCCAAGC CTGCGCTCAA ATGGGCGCTG ATTCGCGAGG TGGCGCAGAT GACCGGCACC ATGCACCGTG CCGGCGTCAA TCACCGCGAC TGTTATATCT GTCATTTCCT GCTGCATACC GACCGGCCGA TTCAGGCCGA TGACCTGCGC CTGTCGGTCA TCGACCTGCA CCGCGCCCAG GTACGCAGCG CCACGCCACG GCGCTGGCGC GACAAGGACC TGGCGGCACT GTATTTTTCT GCGCTGGATA TAGGCCTGAC CCGCCGCGAC AAGCTGCGGT TTCTACGCAG CTACTTCCAG CGTCCTCTGC GCCAGGTACT GCGCGATGAG GCGCGCCTGC TCGCCTGGCT GGAGCGCAAG GCGGCGAAAC TGTACGAGCG TAAGCAGCGT TATGGAGATG CGCTCTGA
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Protein sequence | MLAEPFKSLW AGRDAFEAVE ALQGQVYREL EGRRTLRTEV DGRGYFVKIH RGIGWGEIAK NLLTAKAPVL GAGQEWQAIA RLTEAGVPTM TAVAYGERGA NPASQHSFII TEELAPTVDL EQLSLNWAQQ PPKPALKWAL IREVAQMTGT MHRAGVNHRD CYICHFLLHT DRPIQADDLR LSVIDLHRAQ VRSATPRRWR DKDLAALYFS ALDIGLTRRD KLRFLRSYFQ RPLRQVLRDE ARLLAWLERK AAKLYERKQR YGDAL
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