| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0579 |
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| Symbol | |
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| ID | 5109542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 637193 |
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| End bp | 638236 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501792 |
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| Product | lipopolysaccharide heptosyltransferase II |
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| Protein accession | YP_001186081 |
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| Protein GI | 146305616 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0417722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAT TGATCGTTGG GCCCAGCTGG GTGGGCGACA TGGTGATGGC GCAGACCCTG
TTCCAGTGCC TGAAGCAGCG CCATCCCGAA TGCGAGATCG ACGTGCTGGC GCCCGAGTGG
AGCCGGCCGA TTCTCGAGCG CATGCCCGAG GTGCGCGCCG CGCTGAGCCT GCCGCTGGGC
CATGGCGTGC TCGATCTGGC CACGCGCCGG CGCATCGGCA AGTCGCTGGC CGGCCAGTAC
GACCAGGCCA TCCTGCTGCC CAATTCGCTG AAGTCCGCAC TGGTGCCCTG GTTCGCCGGG
ATTCCCAAAC GCACCGGCTG GAAGGGCGAG ATGCGCTATG GCCTGCTCAA CGATATCCGC
AAGCTGGACA AGGCACGCTA TCCGCTGATG ATCGAGCGTT TCATGGCCCT GGCCTATGAG
CCGGGCGCTG CCTTGCCGCA GCCTTATCCG CAGCCGCGCC TGCAGATCGA TGAGGCCAGT
CGCGAGGCCG CTCTGGCCAA GTTCGAGCTG CAGCTGGATC GCCCGGTGCT GGCGCTGTGC
CCCGGCGCCG AGTTCGGCGA GGCCAAGCGC TGGCCGGCCG AGCACTATGC CAAGGTCGCC
GAGATCAAGA TTCGCGCGGG CTGGCAGGTC TGGCTGTTCG GTTCGAAGAA CGACCATGCC
GGCGGCGAGG ACATTCGCAT GCGCCTGATC CCGGGCCTGC GCGAAGAAGT CAGCAACCTC
TCCGGGCAGA CCAGCCTGGC CGAGGCCATC GACCTGATGT CGGCGGCCAC TGCCGTGGTG
TCCAACGACT CCGGGCTGAT GCACGTGGCG GCAGCGCTGA ATCGCCCGCT GGTGGCCGTC
TACGGCTCCT CTTCGCCGGG TTTCACGCCG CCCTTGGCCG ACCAAGTGGA AATCGTGCGC
CTGGGACTGG ACTGCAGCCC CTGTTTCGAG CGCACCTGTC GCTTTGGTCA CTACAACTGC
CTGCGCGAGC TCAAGCCGCG GCCGGTGATC GAGGCGCTGG ACCGTTTGGT CGGCGATCCG
CTGGCATTGG TCGAGGGCGA CTGA
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| Protein sequence | MKILIVGPSW VGDMVMAQTL FQCLKQRHPE CEIDVLAPEW SRPILERMPE VRAALSLPLG
HGVLDLATRR RIGKSLAGQY DQAILLPNSL KSALVPWFAG IPKRTGWKGE MRYGLLNDIR
KLDKARYPLM IERFMALAYE PGAALPQPYP QPRLQIDEAS REAALAKFEL QLDRPVLALC
PGAEFGEAKR WPAEHYAKVA EIKIRAGWQV WLFGSKNDHA GGEDIRMRLI PGLREEVSNL
SGQTSLAEAI DLMSAATAVV SNDSGLMHVA AALNRPLVAV YGSSSPGFTP PLADQVEIVR
LGLDCSPCFE RTCRFGHYNC LRELKPRPVI EALDRLVGDP LALVEGD
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