| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0576 |
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| Symbol | aceE |
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| ID | 5109539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 630286 |
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| End bp | 632931 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501789 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_001186078 |
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| Protein GI | 146305613 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.27136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00128721 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGACC TCGATCCGAT CGAAACCCAG GAATGGCTGG ACGCCCTTGA ATCCGTCCTC
GACCGTGAGG GTGAAGACCG TGCCCATTAC CTGATGACCC GTCTGGGCGA GCTGGCCACC
CGTAGCGGTG CGCAACTGCC CTACGCGATC ACCACGCCGT ACCGCAACAC CATCCCGGTC
ACCCACGAAG CGCGCATGCC CGGCGACTTG TTCATGGAGC GCCGCATCCG CTCGCTGGTG
CGCTGGAACG CCCTGGCCAT GGTGATGCGC ACCAACCTGG ACGACCCGGA TCTGGGTGGC
CACATTTCCA GCTTCGCCTC CTCGGCGACC CTGTACGACA TCGGCTTCAA CTACTTCTTC
CAGGCCCCGA CCGACGAACA CGGCGGCGAC CTGGTGTTCT ATCAGGGCCA TGCCAGCCCC
GGCGTCTACG CCCGCGCCTT CATGGAAGGG CGCATCAGCG AAGATCAAAT GCAGAACTTC
CGCCGCGAAG TGGATGGCAA GGGCCTGTCC TCCTATCCGC ACCCCTGGCT GATGCCGGAC
TTCTGGCAGT TCCCCACCGT GTCCATGGGC CTCGGCCCGA TCCAGGCGAT CTACCAGGCC
CGCTTCATGA AGTACCTGGA AGCGCGCGGC TTCATTCCCG CCGGCAAGCA GAAGGTCTGG
TGCTTCATGG GCGACGGCGA GTGCGACGAG CCGGAATCCC TCGGCGCCAT TTCCCTGGCC
GGCCGCGAGA AGCTGGACAA CCTGATCTTC GTCATCAACT GCAACCTGCA GCGCCTCGAC
GGCCCGGTGC GCGGCAACGG CAAGATCATC CAGGAACTCG AAGGCGTGTT CCGCGGTGCC
CAGTGGAACG TCAACAAGGT GGTCTGGGGT CGCTTCTGGG ATCCGCTGTT CGCCAAGGAC
AAGGACGGCG CCCTGCAGCG TCGCATGGAC GAAGTGGTCG ACGGTGAATA CCAGAACTAC
AAGGCCAAAG ACGGCGCCTA CGTGCGCGAA AACTTCTTCA ACAGCCCGGA ACTCAAGGAG
ATGGTCAAGG ACCTCTCCGA CGACGAGATC TGGAAACTCA ACCGTGGCGG CCACGACCCC
TACAAGGTCT ACGCGGCTTA CCATCAGGCC GTGAACCACA GCGGCCAGCC GACCGTGATC
CTGGCCAAGA CCATCAAGGG CTACGGTACC GGCGCCGGTG AAGCGAAGAA CACCGCGCAC
AACACCAAGA AGGTCGATGT CGACAGCCTG CGCCAGTTCC GCGACCGCTT CGACATCCCG
GTCAAGGACG AGGACCTGGA AAAGCTGCCG TTCGTCAAAC CGGAGCCGGG CAGCCCCGAG
TACAAGTACC TGCACGAGCG CCGCAACGCG CTGGGCGGCT TCGTCCCGCA GCGCCGGCAG
AAGAGCTTCA GCATCCCCAC GCCGCCGCTG GATACCCTCA AGGCCATCCT CGACGGCTCG
GGCGACCGCG AAATCTCCAC AACCATGGCC TTCGTGCGCA TCCTCGCGCA GCTGGTCAAG
GACAAGGAGC TCGGCCAGCG CATCGTTCCG ATCATCCCGG ACGAGGCCCG TACCTTCGGT
ATGGAAGGCA TGTTCCGTCA GCTCGGCATC TACTCCTCGG TCGGCCAGCT GTACGAGCCG
GTCGATAAAG ACCAGGTGAT GTTCTACAAG GAGGACAAGA AGGGTCAGAT CCTCGAGGAA
GGCATCAACG AAGCCGGCGC CATGAGCTCC TTCATCGCCG CCGGTACCTC GTACTCCAAC
CACAACCAGC CGATGCTGCC GTTCTACATC TTCTACTCGA TGTTCGGCTT CCAGCGTATC
GGCGACCTGG CCTGGGCCGC TGGCGACAGC CGCACCCGTG GCTTCCTGAT CGGCGGCACC
GCCGGCCGTA CCACCCTCAA CGGTGAAGGC CTGCAGCACG AAGACGGTCA CAGCCACATG
CTGGCAGCGA CCATCCCCAA CTGCCGCACC TACGACCCGA CCTATGGCTA CGAGCTCGCC
GTGATCATCC GCGAAGGCAT TCGCCAGATG ACCGAAGAGC AGCAGGACAT CTTCTACTAC
ATCACCGTGA TGAACGAGTC GTACCAGCAG CCGGCCATGC CGGAGGGTAT CGAGCAAGGC
ATCATCAAGG GCATGTACCT GCTCGAGGAA GACAAGAAGG AAGCCGCACA CCACGTGCAG
CTGCTGGGTT CCGGCACCAT TCTGCGCGAA GTGCGCGAAG CGGCGAAGAT CCTGCGCGAC
GAGTACAACA TCGGTGCCGA TGTGTGGAGC GTCACCAGCT TCAACGAACT GCGCCGCGAC
GGCCTGGCCG TGGAGCGTCG CAACCGCCTG CACCCGGGCC AGAAGCCGCA GCAGACCTAC
ATCGAGCAGT GCCTCAGCGG TCGCAAGGGC CCGGTCATCG CCTCCACCGA CTACATGAAG
CTGTTCGCCG AGCAGGTTCG TCAGTGGGTA CCGAGCAAGG AATACAAGGT CCTGGGCACC
GACGGCTTCG GCCGCAGCGA CAGCCGCAAG CAGCTGCGTC ACTTCTTCGA AGTGGATCGC
AACTGGGTCG TGCTGGCCGC CCTGGAAGCC CTGGTAGACC GTGGCGAAAT CGAAGCCAAG
GTGCTGGCTG ACGCCATCGC CAAGTTCGGC ATCGACGCCG ACAAAGCCAA CCCCCTGGAC
TGCTAA
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| Protein sequence | MQDLDPIETQ EWLDALESVL DREGEDRAHY LMTRLGELAT RSGAQLPYAI TTPYRNTIPV
THEARMPGDL FMERRIRSLV RWNALAMVMR TNLDDPDLGG HISSFASSAT LYDIGFNYFF
QAPTDEHGGD LVFYQGHASP GVYARAFMEG RISEDQMQNF RREVDGKGLS SYPHPWLMPD
FWQFPTVSMG LGPIQAIYQA RFMKYLEARG FIPAGKQKVW CFMGDGECDE PESLGAISLA
GREKLDNLIF VINCNLQRLD GPVRGNGKII QELEGVFRGA QWNVNKVVWG RFWDPLFAKD
KDGALQRRMD EVVDGEYQNY KAKDGAYVRE NFFNSPELKE MVKDLSDDEI WKLNRGGHDP
YKVYAAYHQA VNHSGQPTVI LAKTIKGYGT GAGEAKNTAH NTKKVDVDSL RQFRDRFDIP
VKDEDLEKLP FVKPEPGSPE YKYLHERRNA LGGFVPQRRQ KSFSIPTPPL DTLKAILDGS
GDREISTTMA FVRILAQLVK DKELGQRIVP IIPDEARTFG MEGMFRQLGI YSSVGQLYEP
VDKDQVMFYK EDKKGQILEE GINEAGAMSS FIAAGTSYSN HNQPMLPFYI FYSMFGFQRI
GDLAWAAGDS RTRGFLIGGT AGRTTLNGEG LQHEDGHSHM LAATIPNCRT YDPTYGYELA
VIIREGIRQM TEEQQDIFYY ITVMNESYQQ PAMPEGIEQG IIKGMYLLEE DKKEAAHHVQ
LLGSGTILRE VREAAKILRD EYNIGADVWS VTSFNELRRD GLAVERRNRL HPGQKPQQTY
IEQCLSGRKG PVIASTDYMK LFAEQVRQWV PSKEYKVLGT DGFGRSDSRK QLRHFFEVDR
NWVVLAALEA LVDRGEIEAK VLADAIAKFG IDADKANPLD C
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