| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0566 |
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| Symbol | |
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| ID | 5108190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 616413 |
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| End bp | 617495 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640501779 |
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| Product | appr-1-p processing domain-containing protein |
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| Protein accession | YP_001186068 |
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| Protein GI | 146305603 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00315958 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000000126999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTAGAT TTACACAAGG CAATTTGCTG GAGGCCAAGG TCGATGCCTT GGTCAATACC
GTCAACACTG TCGGCGTGAT GGGCAAAGGT ATTGCCCTGA TGTTCAAGGA GCGCTTTGCT
GAGAACTACC GGCTATACGC GGCAGCCTGC AAAGCCAAAC AGGTTGAAAC TGGCAAGATG
TTTGTTACCC CGGTGCAGGA ACTGGATGGT CCGCGCTGGA TCGTCAACTT CCCCACCAAG
CGGCATTGGA AGGCTCCTTC CAAGATGGAA TGGGTCGTTG AGGGGTTGAC TGATCTGCGT
ACCTTTATCC TCGATAATCA TATCGAGTCG ATTGCCGTAC CTCCGCTGGG GGCCGGTAAT
GGGGGGCTGG AATGGATGGC TGTACGCGAG CAGATCGAGG CTGTTCTGGG CGACCTGCAT
GCTGAGATTT TGGTGTTTGA ACCCACTTCG CAGTATCAGA ACGTTGCCAA GCGCTCAGGG
GTAGAGAAGT TGACGCCGGC CCGTGCCTTG ATCGCCGAGT TGGTAAGGCG CTACTGGGTA
TTGGGTATGG AATGCAGCTT TCTGGAAGTG CAGAAGCTGG CCTGGTTTCT GGAGCGCGGT
ATCGAGCGAT TTTCGCCTGC AGACAATCCA CTGAACCTTC AGTTTGTTGC CCATAAATAC
GGGCCCTATG CCAACCGTCT TGAGCATTTG CTGAACAATC TGGATGGCAG CTATCTGCAT
GCCGAAAAAC GTATCAGCGA TTCGGACCCG CTTGATGTCA TCTGGTTTGA TGACGAGCGT
AAGGCCTATT TGCAGGCTTA CTTAAACACT GAGTCAAAGC CCTATCTTGA GGCCTTGGAA
CGTACAGCAG ACCTTATCGA CGGCTTTGAG TCGCCCTTTG GTATGGAGCT TTTGGCGACC
GTAGATTGGC TGTTGGCCAA GGAGCATGTT GAGGCTACGG TGCCGGCTGT ACGGCAAGCG
CTAAGGAAGT GGGGCGGTGG GCCAGGTGCT GCTACACGCA AGGATCGCTT GTTTGATGAT
CGTGCGTTGG CCATTGCCTT GGAGCGCCTG ACGCAGTCGG GTTTTAGTGC TGTAGCGGCT
TGA
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| Protein sequence | MIRFTQGNLL EAKVDALVNT VNTVGVMGKG IALMFKERFA ENYRLYAAAC KAKQVETGKM
FVTPVQELDG PRWIVNFPTK RHWKAPSKME WVVEGLTDLR TFILDNHIES IAVPPLGAGN
GGLEWMAVRE QIEAVLGDLH AEILVFEPTS QYQNVAKRSG VEKLTPARAL IAELVRRYWV
LGMECSFLEV QKLAWFLERG IERFSPADNP LNLQFVAHKY GPYANRLEHL LNNLDGSYLH
AEKRISDSDP LDVIWFDDER KAYLQAYLNT ESKPYLEALE RTADLIDGFE SPFGMELLAT
VDWLLAKEHV EATVPAVRQA LRKWGGGPGA ATRKDRLFDD RALAIALERL TQSGFSAVAA
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