| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0560 |
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| Symbol | |
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| ID | 5108184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 606653 |
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| End bp | 608398 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501773 |
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| Product | potassium/proton antiporter |
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| Protein accession | YP_001186062 |
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| Protein GI | 146305597 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.761529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000416087 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATGCCA GCGCCATCAA CAATCTGTTC TTGATCGGCG CCTTGCTGGT AGCAGCCAGC
ATTCTGGTCA GCGCGTTCGG CACCCGCTTC GGCATCCCCA TCCTGGTGAT CTTCCTTGCG
GTCGGCATGC TCGCCGGTAC CGACGGACCT GGCGGCATCG TCTTCAACAA CTACCCACTG
GCCTATCTGG TCGGCAACCT GGCGTTGGCG GTGATCCTGC TCGACGGTGG CATGCGCACA
CGGGTCTCCA GCTTCCGTGT GGCCCTGTGG CCTTCCTTGT CATTGGCGAC GGTCGGAGTG
GTGATAACGG CGGGTTTGAC CGGTCTGGCC GCGGCCTGGC TATTCAACCT GACGCTGCTC
GAGGGCCTGC TGATCGGCGC CATCGTCGGT TCCACCGATG CCGCGGCGGT GTTCTCCCTG
CTGGGCGGGC GCGGTCTCAA CGAACGGGTC AGCTCCACAC TGGAAATCGA GTCCGGTAGC
AACGACCCGA TGGCGGTGTT CCTCACCGTG ACCCTGATCG CCATGCTCGC CAGCGGCCAG
ACCGGCTTCA GCTGGGACCT GCCGATCCAG CTGGTGCAGC AGTTCGGTCT CGGCGCTCTG
CTCGGCCTGG GTGGCGGCTG GCTGCTGCTG AAACTGATCA ATCGCATGGA GCTGGCTACC
GGCCTGTATC CGCTACTGGT GGTCAGCGGC GGCCTGATCA TCTTTGCCAT CACCACCGCC
GTGGGTGGCA GCGGCATCCT CGCCATCTAC CTGTGCGGCC TGCTGCTGGG CAACCGACCG
ATCCGTTCGC GCCACGGCAT TCTGCACATG CTCGACGGCC TCACCTGGCT GGCGCAGATC
GGCATGTTCC TCGTCCTCGG CCTTCTGATC ACCCCGCACG AGCTGCTGCC GATCGCCCTG
CCGGCACTGG CCCTGGCACT GTGGATGATC CTCTTCGCGC GACCGCTGTC GATCTTTCTC
GGCCTGCTGC CATTTCGCGC CTTCCACGAC CGCGAGCGGA TCTTCATCGC CTGGGTCGGT
CTGCGCGGCG CGGTGCCGAT CATCCTCGCG GTATTCCCGC TGATGGCCGG CCTGCCCAAT
GCGCAGCTGT TCTTCAACGT CGCCTTCTTC ATCGTGATCG TCTCCCTGTT GCTGCAGGGC
ACCAGCCTGC CGCTGGCGGC CAAGCTGATG CGCGTCACCG TACCGCCAGA GCCGGCCCCG
GTGTCACGCG CCGGCCTTGA AGTGCACCCG ACCAGCCAGT GGGAGCTGTT CGTCTACCGC
CTTGGCGCCG AGAAATGGTG CATCGGCGCC GCCCTGCGTG AGCTGAACAT GCCCGAGGGT
ACGCGTATCG CCGCTCTGTT CCGCGGCCGC GAGCTGCTTC ACCCATCGGG CAGCACGCGC
CTGGAGGCCG GGGATCTGCT CTGCGTGATC GGCCATGAGC ACGACCTGCC GGCGCTCGGC
AAACTGTTCA GCCAGGCTCC CAAACGGGGC CAGGACCTGC GCTTCTTCGG CGACTTCGTA
CTTGAAGGTG ACGCCGAACT GGCCGCCGTG GCCGCGCTCT ACGGCCTCAA GCTGGACGGT
CTGGACGGCC ATCAGCCGCT GGGCCGTTTC ATCGCCCATG AAATCGGCGG CGAGCCGGTG
GTCGGCGATC AGGTGGAGTG GCAGGGTCTG ACCTGGACGG TGGCCTCGAT GGAAGGGAAC
AAGGTGCGCA AGGTCGGCGT CAGATTCCCC GAGGGCAGTC GTCCGGGCCC CGGGCTGTTC
CTCTGA
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| Protein sequence | MDASAINNLF LIGALLVAAS ILVSAFGTRF GIPILVIFLA VGMLAGTDGP GGIVFNNYPL
AYLVGNLALA VILLDGGMRT RVSSFRVALW PSLSLATVGV VITAGLTGLA AAWLFNLTLL
EGLLIGAIVG STDAAAVFSL LGGRGLNERV SSTLEIESGS NDPMAVFLTV TLIAMLASGQ
TGFSWDLPIQ LVQQFGLGAL LGLGGGWLLL KLINRMELAT GLYPLLVVSG GLIIFAITTA
VGGSGILAIY LCGLLLGNRP IRSRHGILHM LDGLTWLAQI GMFLVLGLLI TPHELLPIAL
PALALALWMI LFARPLSIFL GLLPFRAFHD RERIFIAWVG LRGAVPIILA VFPLMAGLPN
AQLFFNVAFF IVIVSLLLQG TSLPLAAKLM RVTVPPEPAP VSRAGLEVHP TSQWELFVYR
LGAEKWCIGA ALRELNMPEG TRIAALFRGR ELLHPSGSTR LEAGDLLCVI GHEHDLPALG
KLFSQAPKRG QDLRFFGDFV LEGDAELAAV AALYGLKLDG LDGHQPLGRF IAHEIGGEPV
VGDQVEWQGL TWTVASMEGN KVRKVGVRFP EGSRPGPGLF L
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