| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0556 |
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| Symbol | |
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| ID | 5108180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 599167 |
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| End bp | 599601 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640501769 |
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| Product | thioredoxin |
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| Protein accession | YP_001186058 |
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| Protein GI | 146305593 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000127919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCCGATC CGCTGCTGAT TCCCTGCCCG CACTGCAACG GGCTCAACCG CATCCCTGCC
GAGCGCCTGG GCGATGCCCC ACGCTGTGGG CGCTGCAAGA CCGAGGTGCT GCCTGCAGCG
CCCATCGAAC TGACCCAGAA CAACTTCGCC AGCCAGCTCA AGGGCGACCT GCCCCTGCTG
GTGGACGTCT GGGCCAGCTG GTGCGGACCC TGCCAGGCCT TCGCGCCGAC CTTCGCCCAG
GCCGCGGCGC AGCTGCAGGG GCGCTGCCGC CTGGGCAAAC TGGACAGCGA GGCCAACCCG
CAGCTGTCCG GCCAGCTCGG CATTCGCTCC ATTCCCAGCC TGATCCTGTT CAAGGGTGGC
GCGGAAGTGG CCCGCCAGAG CGGCGCCATG CCGCTGCCGC AACTGCTGGC CTGGCTGCGC
CAGCAGGGCG TCTAG
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| Protein sequence | MSDPLLIPCP HCNGLNRIPA ERLGDAPRCG RCKTEVLPAA PIELTQNNFA SQLKGDLPLL
VDVWASWCGP CQAFAPTFAQ AAAQLQGRCR LGKLDSEANP QLSGQLGIRS IPSLILFKGG
AEVARQSGAM PLPQLLAWLR QQGV
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