| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0548 |
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| Symbol | aroB |
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| ID | 5108172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 586594 |
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| End bp | 587697 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640501761 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001186050 |
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| Protein GI | 146305585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTC TTCACGTTGA ACTCGGCGAG CGCAGCTATC CCATCTATAT CGGGAGCGGG
CTGCTGTCGC GTCCCGAATT ACTGTCTCGT CACGTCGCGG GGCGGCAGGT TGCAGTGGTC
ACCAATGAAA CCGTCGCACC TCTTTACCTG CAGACCCTGT TGAAATCGCT GGAAGGTTTC
AATGTCGCCA CGGTGGTGCT GCCCGATGGC GAGGCATTCA AGAATTGGGA AACCCTGCAA
CTGATCTTCG ATGGCCTGCT GACGGCGCGT CATGATCGTC GCACCACGGT CGTTGCGCTT
GGCGGTGGGG TGATCGGCGA TATGGCCGGC TTCGCCGCTG CCTGCTATCA ACGCGGCGTG
GATTTCATCC AGGTGCCCAC CACCCTGTTG TCGCAGGTCG ATTCGTCGGT GGGGGGGAAA
ACCGGGATCA ACCATCCGCT TGGCAAGAAT ATGGTGGGTG CCTTCTATCA GCCCAAGGCG
GTCCTGATCG ATACCGCCAG CCTCGATACG TTGCCGGCGC GCGAGCTTTC GGCCGGATTG
GCCGAGGTGA TCAAGTACGG CCTGATTTGC GACGAGCCGT TTCTGGGCTG GCTCGAAGCC
AACATGGCTG CGCTGCGCAG CCTTGATCAG GATGCCCTGA CCTATGCTAT CGAACGTTCA
TGCGCTGCCA AGGCGCAGGT GGTCGGGGCG GATGAGCGTG AATCTGGGGT GCGTGCGACG
CTGAACCTCG GTCACACCTT CGGCCACGCG ATCGAGACCG AGCAGGGCTA CGGCGTCTGG
TTGCATGGCG AAGCGGTCGC TGCCGGTACG GTGATGGCGC TGGAAATGTC TCATCGGCTT
GGCTGGATCT CCGTCGCCGA GCGCGATCGC GGCGTTCGTC TGCTGCAGGC CGCGGGATTG
CCTATCGTGC CGCCGCGGGA CATGACGCCG GCGCAGTTTC TTGAACATAT GGCGGTAGAC
AAGAAGGTGC TGGATGGCCA GTTGCGCCTG GTGTTGCTCA AGCGCCTGGG CGAGGCCGTC
GTTACCGCCG ACTATCCGCG TGAAATTCTC GACGCCACGC TGCGTAGCGA CTACGTAGCG
CTGGCTCAGT CGTTCAACTC TTGA
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| Protein sequence | MQTLHVELGE RSYPIYIGSG LLSRPELLSR HVAGRQVAVV TNETVAPLYL QTLLKSLEGF
NVATVVLPDG EAFKNWETLQ LIFDGLLTAR HDRRTTVVAL GGGVIGDMAG FAAACYQRGV
DFIQVPTTLL SQVDSSVGGK TGINHPLGKN MVGAFYQPKA VLIDTASLDT LPARELSAGL
AEVIKYGLIC DEPFLGWLEA NMAALRSLDQ DALTYAIERS CAAKAQVVGA DERESGVRAT
LNLGHTFGHA IETEQGYGVW LHGEAVAAGT VMALEMSHRL GWISVAERDR GVRLLQAAGL
PIVPPRDMTP AQFLEHMAVD KKVLDGQLRL VLLKRLGEAV VTADYPREIL DATLRSDYVA
LAQSFNS
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