| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0538 |
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| Symbol | |
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| ID | 5108162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 574676 |
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| End bp | 575476 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501751 |
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| Product | nuclease |
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| Protein accession | YP_001186040 |
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| Protein GI | 146305575 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCACT CCGTGATACT GAAAAAGGCG TCCCTGGTGG GCGCCTTTTT CATTTCTCTT
CTCTGTGTCG ACCTGGCCCA GGCCTTCTGC CCGCTGCGCG GCGATCTTGC CCAGGTCGCC
GTGCGCCAGG TGGTCGATGG CGACACGGTG CGCCTGGACG ATGGGCGCAG CGTCCGTCTG
ATCGGCCTCA ATGCCCCCGA GCTGGGGCGC AAGGGGCGCC CTGACGAGCC GTTCGCGGTA
CAGGCCAAGC GCCGTCTGCA GGCGCTGGTG GATGCCGGCG ACGGGCGCGT CGGCCTGCGT
TACGGCAAGC AGCGCAAGGA TCGTTACGGG CGCACCCTGG CCCATCTCTA CGACCGCCAG
GGGCGCAATC TGGAGGCGCA GCTGCTGGGC GAGGGGCTGG GTTTCATGGT GGCGGTCGCG
CCGAATGCCG AACTGGCGAG TTGCCATGCC GCGGCCGAGC GCCAGGCGCG CAATGCACGT
CTGGGGCTGT GGCGGCAGGA TCAGGTGAAG CTGGCCGGGC AGCTGCATGG CGGCGGGTTC
GCCCTGCTGG GCGGTCGCGT GCGCGAGGTG CAGCGCAATC GAGGCGGTCT CTGGCTCGAG
CTCGATGGCG GCAGGGTGCT GCGTGTGGCG CCGGAGTTGC TCGATCAGTT CGACGCACGC
GCCCTGCAGC GTCTCGAAGG GCGGCGCGTG GAGGCGCGCG GCTGGGTCAT CGATCGCCAG
TCGCGTGGCG GCTTGAAAAA CGGGCAGGCA CGCTGGATGC TGCCGCTTAC CCATTCGGCG
ATGCTGGAGG TGTTGCCATG A
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| Protein sequence | MRHSVILKKA SLVGAFFISL LCVDLAQAFC PLRGDLAQVA VRQVVDGDTV RLDDGRSVRL
IGLNAPELGR KGRPDEPFAV QAKRRLQALV DAGDGRVGLR YGKQRKDRYG RTLAHLYDRQ
GRNLEAQLLG EGLGFMVAVA PNAELASCHA AAERQARNAR LGLWRQDQVK LAGQLHGGGF
ALLGGRVREV QRNRGGLWLE LDGGRVLRVA PELLDQFDAR ALQRLEGRRV EARGWVIDRQ
SRGGLKNGQA RWMLPLTHSA MLEVLP
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