Gene Pmen_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0495 
Symbol 
ID5108414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp531273 
End bp533333 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content65% 
IMG OID640501708 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001185997 
Protein GI146305532 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG AAGCAATGTT CCAGCCGATC CAGATCGGCA AACTGACCAT CCGCAACCGC 
GTGCTCTCCA CCGCGCACGC CGAGGTCTAC GCCACCGACG GCGGCATGAC CACCGAGCGC
TACGTCAAGT ATTACGAAGA GAAGGCCAAG GGCGGCATCG GCCTGGCCAT CTGCGGCGGT
TCCTCCGTGG TGGCCATCGA CAGCCCGCAG GAATGGTGGA GCTCGGTCAA CCTGTCCACC
GACCGCATCA TCCCGCACTT CCAGAATCTG GCCGACGCCA TGCACAAGCA CGGCGCCAAG
ATCATGATTC AGATTACCCA CATGGGTCGC CGCTCGCGCT GGGACGGCTT CAACTGGCCG
ACCCTGATGT CGCCGTCGGG CATCCGCGAA CCCGTGCACC GCGCCACCTG CAAGACCATC
GAGCCGGAAG ATATCTGGCG CGTGATCGGC AACTACGCCC AGGCCGCACG CCGGGCCAAG
GAAGGCGGCC TGGACGGCGT CGAGCTGTCT GCCGTGCACC AGCACATGAT CGACCAGTTC
TGGTCGCCGC GGGTCAACAA GCGTACCGAC GAATGGGGCG GCAGCTTCGA GGGCCGCATG
AAGTTCGGTC TGGAAGTGCT CAAGGCGGTG CGTGCCGAAG TGGGCCCGGA CTTCTGCGTG
GGCATGCGTA TCTGCGGCGA CGAGTTCCAT CCGGACGGCC TGTCCCATGA GGACATGAAG
CAGATCGCCG CCTACTACGA CGCCACCGGC ATGATCGATT TCATCGGCGT GGTGGGCTCG
GGCTGCGACA CCCACAACAC CCTGGCCAAC GTCATCCCCA ACATGAGCTA CCCGCCGGAG
CCCTTCCTGC ACCTGGCGGC CGGCATCAAG GAAGTGGTCA AGGTGCCGGT GCTGCACGCG
CAGAACATCA AGGACCCGAA CCAGGCCACC CGTATCCTCG AGGGCGGCTA CGTGGACATG
GTCGGCATGA CCCGCGCGCA TATCGCCGAC CCGCACCTGA TCGCCAAGAT CAAGATGGGC
CAGGTCGACC AGATCAAGCA GTGCGTCGGC GCCAACTACT GCATCGACCG CCAGTACCAG
GGCCTGGACG TGCTGTGCAT CCAGAACGCC GCGACGTCCC GCGAATACAT GGGCGTGCCG
CACATCATCG AGAAATCCAC CGGGCCCAAG CGCAAGGTGG TGATCGTCGG CGGCGGCCCG
GCCGGGATGG AAGCGGCACG TGTCGCTGCC GAGCGTGGCC ACGACGTCAC CCTGTTCGAG
AAGAAGGATG CCCTGGGCGG CCAGATCACC ACCGCATCCA AAGCCCCGCA GCGCGACCAG
ATCGCCGGCA TCACCCGCTG GTATCAGCTG GAGCTGGCAC GCCTGGGCAT CGACCTGCGC
CTGGGCACCG CCGCCGACGT GGCGACCATT CAGGACATGC GCGCCGACAT CATCATTCTG
GCCAATGGCG GCCATCCTTA CCTGGAGCAG AACGAGCACT GGGGCGCGGC CGAAGGCCTG
GTGGTGAGCA GCTGGGACGT GCTCGACGGC AAGGTGGCGC CGGGCAAGAA CGTGCTGGTC
TACGACACCA TCTGCGAATT CACCGGCATG TCGGTGGCCG ACTTCATGGC CGACAAGGGC
TCGCAGGTCG AGATCGTCAC CGACGACATC AAGCCGGGCG TGGCCATGGG CGGCACCAGC
TTCCCCACCT ACTACCGCAG CATCTACCCC AAGGAAGTGA TCATGACCGG CGACATGATG
CTGGAAAAGG TCTACCGCGA GGGCGACAAG CTGGTGGCGG TGCTGGAGAA CGAATACACC
GGCGCCAAGG AAGAGCGCGT GGTCGACCAG GTGGTGGTGG AGAACGGCGT GCGTCCGGAC
GAGTCGCTGT ACTACGCGCT GAAGGAAGGC TCGCGCAACA AGGGCCAGAT CGACGTCGAG
GCGCTGTTCG CGATCAAGCC GCAGCCCTGC CTGTCCGAGC CGGGCGACGG CTACCTGCTG
TTCCGTATCG GCGACTGCGT GGCGCAGCGC AACACCCACG CGGCGATCTA CGACGCCCTG
CGTCTGTGCA AGGACTTTTA A
 
Protein sequence
MAFEAMFQPI QIGKLTIRNR VLSTAHAEVY ATDGGMTTER YVKYYEEKAK GGIGLAICGG 
SSVVAIDSPQ EWWSSVNLST DRIIPHFQNL ADAMHKHGAK IMIQITHMGR RSRWDGFNWP
TLMSPSGIRE PVHRATCKTI EPEDIWRVIG NYAQAARRAK EGGLDGVELS AVHQHMIDQF
WSPRVNKRTD EWGGSFEGRM KFGLEVLKAV RAEVGPDFCV GMRICGDEFH PDGLSHEDMK
QIAAYYDATG MIDFIGVVGS GCDTHNTLAN VIPNMSYPPE PFLHLAAGIK EVVKVPVLHA
QNIKDPNQAT RILEGGYVDM VGMTRAHIAD PHLIAKIKMG QVDQIKQCVG ANYCIDRQYQ
GLDVLCIQNA ATSREYMGVP HIIEKSTGPK RKVVIVGGGP AGMEAARVAA ERGHDVTLFE
KKDALGGQIT TASKAPQRDQ IAGITRWYQL ELARLGIDLR LGTAADVATI QDMRADIIIL
ANGGHPYLEQ NEHWGAAEGL VVSSWDVLDG KVAPGKNVLV YDTICEFTGM SVADFMADKG
SQVEIVTDDI KPGVAMGGTS FPTYYRSIYP KEVIMTGDMM LEKVYREGDK LVAVLENEYT
GAKEERVVDQ VVVENGVRPD ESLYYALKEG SRNKGQIDVE ALFAIKPQPC LSEPGDGYLL
FRIGDCVAQR NTHAAIYDAL RLCKDF