| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0475 |
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| Symbol | |
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| ID | 5108394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 505976 |
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| End bp | 507874 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501688 |
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| Product | citrate transporter |
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| Protein accession | YP_001185977 |
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| Protein GI | 146305512 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGTG CGCACCAATG CCCAGGCTCG CCGGCCACGC ACAACCGGCA TCTTTCGCGC
CCCGCACAAG GACAGTTCCG CGCCATGACC CTCGACCAAG GCCTGATCTT CGCCATTCTC
GTCGCCAGCA TGGGGCTGTT CATCTGGGGC CGCTGGCGTC ACGACGTGGT CGCCCTGGGC
GCCCTGCTGG CCTGCGTGAT CGCCGGCCTG GTGAAGGAGG AGGAAGCCTT CACCGGCTTC
GGCCACCCGG CGGTGATCAC CGTGGCCTGC GTGCTGGTGC TCAGCCACGG CCTGCAGAGC
ACCGGCGCGG TCAACCGTCT GGCCCAGCGC CTGCTGCCCA GCGGCGCCGG CGTGCTGCTG
TCGCTCGCGG CGCTGACCGG TCTCGGCGCC CTGCTCTCGG CCTTCATGAA CAACGTCGGG
GCGCTCGCCC TGCTGATGCC CATCGCCCTG CAGATTGCCG CACGCCTGGA ATTGCCACCC
GGCCGGGTGC TGATGCCGCT GGCCTTCGGC ACCATCCTCG GCGGCATGAC CACGCTGATC
GGCACGCCGC CCAACCTGAT CGTTTCCAGC TTCCGCGCGC AACACGGCAA TGGCCCGTTC
GCCATGTTCG ATTTCAGCCC GGTGGGCGTG GCGGTGGCGC TGGCCGGCGT GCTGTTCATC
ACCCTGCTTG GCTGGCGCCT GGTACCCAGA CGCGAAGTGG GCAACGCCGC CAGCTTCGAT
ACCGGCCGCT ACCTCACCGA GGCGCGCGTC AAGGAAGGCG GCAAGGCCCA GGGCAAGACC
CTGCGCGAGA TCGAGCAGTT GCTCGACGAG GCCGACGCCC AGGTGGTGGC CATGGTGCGC
AACAAGCTGC GCCTGAGCGC GCCCAACCCG CGCCGCGTGC TGCAGGCCGA CGACGTACTG
GTGATCGAGG CCGATCCGCA GGAACTGGGT GAGGTGCTGG GCCAGCTCGA CCTGCTGCTG
GAGGCCGAAC GCGAGGCCAA GGAAGCCGAG CAGCAGCGCA AGGACAACGG CGGCGAAACC
GAAAAGAAGG AAGCCAACAG CGAGGAGCGC GGCCTGCTGG AACTGCTGGT CAAACCCGAC
TCGCCGCTGA TCGGCCGCTC CGCCAGCAGC ACGCGCTTGC GCAGCCGTTA CTCCATCAGC
CTGCTGGCCA TCTCCAGACA GAGCCACCGC TCGATCAAAC GCCTGCGTTC GACCCTGATC
CAGAGCGGCG ATGTGCTGCT GATGCAGGGC AGCGCCGAGG ACGTCAGCGA GTTCGCCAGC
GACTACGGCT GCGTGCCGCT GGCCGCCCGC GCCATCAACA TTCCCGATCC ACGCCAGGCC
AATCTGGCCC TGGGCGTGAT GCTGCTGGCC ATCGCCACGG CTGCCTTCGG CCTGCTCTCG
GCCGCGGTGG CCTTCTCCGC CGGGGTGCTG GCCTACATGC TGCTGCGCCT GATCCCGCTG
CGCGCGGTGT ACGAAGCGGT CGACTGGCCG GTGATCGTGC TGCTCGGCGC GCTGATCCCG
GTGGCCGGCG CCATGTCGGA AACTGGCGCC GCCGATCTGC TGGCGCGGGT GCTGATGGAG
CATCTGGCCC AGGGCAATGC CATCGTCACC CTGACCCTGC TGCTGGTGGT GACCATGACC
CTGTCGGATT TCATGAACAA CGCCGCCACC GCTGCGGTGA TGTGCCCCAT TGCCCTCAGC
GCCGCCAGCC AGCTCGGCGT CAGCCCCGAC TCGCTGCTGA TGGCGGTGGC CATCGGCGCC
TCGTGCTCCT TCCTCACCCC CATCGGCCAC CAGAACAACA CCCTGATCCT CAGCCCCGGC
GGCTTCCGTT TCGGCGACTA CTGGCGCCTC GGCCTGCCGA TGGAGATTCT CGTGGTGCTG
GTCAGCGTGC CGCTGCTGCT CTGGGTCTGG CCGCTGTAG
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| Protein sequence | MRRAHQCPGS PATHNRHLSR PAQGQFRAMT LDQGLIFAIL VASMGLFIWG RWRHDVVALG
ALLACVIAGL VKEEEAFTGF GHPAVITVAC VLVLSHGLQS TGAVNRLAQR LLPSGAGVLL
SLAALTGLGA LLSAFMNNVG ALALLMPIAL QIAARLELPP GRVLMPLAFG TILGGMTTLI
GTPPNLIVSS FRAQHGNGPF AMFDFSPVGV AVALAGVLFI TLLGWRLVPR REVGNAASFD
TGRYLTEARV KEGGKAQGKT LREIEQLLDE ADAQVVAMVR NKLRLSAPNP RRVLQADDVL
VIEADPQELG EVLGQLDLLL EAEREAKEAE QQRKDNGGET EKKEANSEER GLLELLVKPD
SPLIGRSASS TRLRSRYSIS LLAISRQSHR SIKRLRSTLI QSGDVLLMQG SAEDVSEFAS
DYGCVPLAAR AINIPDPRQA NLALGVMLLA IATAAFGLLS AAVAFSAGVL AYMLLRLIPL
RAVYEAVDWP VIVLLGALIP VAGAMSETGA ADLLARVLME HLAQGNAIVT LTLLLVVTMT
LSDFMNNAAT AAVMCPIALS AASQLGVSPD SLLMAVAIGA SCSFLTPIGH QNNTLILSPG
GFRFGDYWRL GLPMEILVVL VSVPLLLWVW PL
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