| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0421 |
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| Symbol | |
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| ID | 5108343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 444964 |
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| End bp | 445722 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640501637 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001185926 |
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| Protein GI | 146305461 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAT TCCAGCGCCA GATTATCGCC ACGCTTTTAC TGTACTGTTG CGCCTTCGCC
GCCCGCGGCG AAACGCTGCG CCTGGTCACG GATGCCTGGG CGCCCTACGT CTACGAGGAA
GACGGCCAGG CCGCTGGTCT CGACTACGAG CTCACCCGCG AGGTACTGCA GCGCCTGGGG
GTAAAGCTGG ACCTGCAGTT CCTGCCGTGG AAGCGCTGCC TGCTGGAGCT GGAACAAGGC
AATGCAGACG GCATACTGGA TATTTTCCAC CTGCCCGAGC GCGAAGCGAG CATGCTCTTC
GTCGAAGAGC CGCTGAGCGA CGTCGAACTG GTACTGTTCT ACGCACGTAA CCGCCCCTAC
CCCTATGACA GCCTGGAAGA CCTGCGCGAC CTGGTGATCG GCATCTCGCC AGGCTACTGG
TACAACGACG AAACCTTCCG CAATTCGCCC TTGTTCAGTC GCGAAGTGGC TCCGACTCAC
GAGGCCAATC TGGGCAAGCT GATCCGCCAC CGCGTCGACC TGGTCATCAA TGACCGTCGC
GCCGGCCTCT ACCTGACCAC CCAGATGGGC TTGCAACAGC AGGTCGACTA CAACCGCAAG
GCGGTCGGCC ACGACCGTCT ATACCTCGCG CTGCGTCACG ACCCTGCCCT GGCTAGCCTG
GCCAGGGACT TCGCTGACGA ACTGCGCCGC TTCAAGCGCG AACCAGCCTA TGCCCAGCTG
CAGCAGCGCT ACGCCAACCC CGATCGACTC AGGCCGTGA
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| Protein sequence | MPLFQRQIIA TLLLYCCAFA ARGETLRLVT DAWAPYVYEE DGQAAGLDYE LTREVLQRLG
VKLDLQFLPW KRCLLELEQG NADGILDIFH LPEREASMLF VEEPLSDVEL VLFYARNRPY
PYDSLEDLRD LVIGISPGYW YNDETFRNSP LFSREVAPTH EANLGKLIRH RVDLVINDRR
AGLYLTTQMG LQQQVDYNRK AVGHDRLYLA LRHDPALASL ARDFADELRR FKREPAYAQL
QQRYANPDRL RP
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