| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0414 |
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| Symbol | |
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| ID | 5108336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 436372 |
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| End bp | 437868 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501630 |
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| Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
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| Protein accession | YP_001185919 |
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| Protein GI | 146305454 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTG TCGGACACCT GATCAACGGC GAGCTGCGCA CCGATGCCAG CCGCACCCAG
GACATCTTCA ACCCGGCTAC CGGCCTGGCG GAGAAACAAC TCGCGCTGGC CCCCAAAGCG
ACCGTCGAAG AGGCCATCGC TACAGCCGAG GCGGCCTTCC CGCAATGGCG CGACACCCCG
CCGATCAAGC GCGCGCGGGT GATGTTCCGC TTCAAGGAGC TGCTCGAACA GCACGCCGAT
GAAATCTGCC GCCTGATCGG CCAGGAGCAC GGCAAGATCG TGCATGACGC CGCAGGCGAG
CTGCAGCGCG GCATCGAGAA CGTCGAGTAC GCCTGTGGCG CACCCGAGCT GCTCAAGGGC
GAGCACAGCA AGAACGTCGG GCCGAACATC GACTCCTGGA GCGAATTCCA GCCGCTGGGC
GTGGTCGCCG GCATCACCCC GTTCAACTTC CCGGTGATGG TGCCGCTGTG GATGTTCCCC
ATGGCCATCG TGTGCGGCAA CACCTTCGTC CTCAAGCCGT CCGAGCGCGA CCCGAGCTCG
ACCCTGCTGC TGGGCAAACT GCTGCACGAA GCCGGCCTGC CGGCAGGCGT GTTCAACATC
GTCAACGGCG ACAAGGAAGC CGTCGATACC CTGCTGCACG ACTCGCGCGT GCAGGCCGTC
AGCTTCGTCG GCTCGACGCC CATCGCCGAG TACATCTACG CCACTGCCAG CGCCAACGGC
AAACGCTGCC AGGCACTGGG CGGCGCCAAG AACCACGCCA TCGTGTTGCC CGATGCGGAC
ATGGACAACG TGGTCAACTC CCTGCTGGGC GCGGCCTTCG GCTCGTCCGG CGAGCGTTGC
ATGGCGCTGT CGGTGGCCGT GGCAGTCGGC GACAAGGCCG CCGATGAGCT GATCAGCAAG
ATGCAGGAAG CCATCAAGGG CCTGAAAGTC GGCGCCTACG ACGACAAGTC CAACGACTTC
GGCCCGGTCA TCACCCGCGA ACACCAGGCC AGGGTCGTCG GCCATATCAG CAGCGCCGAA
GCACAGGGCG CGACCGTCGT GGTCGATGGC CGCGACCCGC AGATCGAAGG CTATGCCAAC
GGCTTCTTCG TCGGCGCCAC CCTGATCGAC CACGTCACCA CCGACATGGA CAGCTACAAG
GCCGAGATCT TCGGCCCCGT GCTGCAGGTC GTGCGCGTCT CGACCATGCG TGAGGCCATG
GACATCATCG ATGCCCACGA GTACGGCAAC GGCACCTGCA TCTATACCCG CGACGGCGAG
GCCGCCCGCT ACTTCAGCGA CCACATCAAG GTCGGCATGG TCGGCATCAA CGTGCCGCTG
CCGGTTCCGG TGGCGTACCA CAGCTTCGGC GGCTGGAAGC GCTCGCTGTT CGGCGACCTG
CACGCCTACG GCCCGGACGC CGTGCGTTTC TACACCAGGC GCAAGACCGT CACCCAGCGC
TGGCCGTCGG CCAACGTGCG TGAGGGCGCG GAGTTCTCCA TGCCGACCAT GAAGTAA
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| Protein sequence | MSIVGHLING ELRTDASRTQ DIFNPATGLA EKQLALAPKA TVEEAIATAE AAFPQWRDTP
PIKRARVMFR FKELLEQHAD EICRLIGQEH GKIVHDAAGE LQRGIENVEY ACGAPELLKG
EHSKNVGPNI DSWSEFQPLG VVAGITPFNF PVMVPLWMFP MAIVCGNTFV LKPSERDPSS
TLLLGKLLHE AGLPAGVFNI VNGDKEAVDT LLHDSRVQAV SFVGSTPIAE YIYATASANG
KRCQALGGAK NHAIVLPDAD MDNVVNSLLG AAFGSSGERC MALSVAVAVG DKAADELISK
MQEAIKGLKV GAYDDKSNDF GPVITREHQA RVVGHISSAE AQGATVVVDG RDPQIEGYAN
GFFVGATLID HVTTDMDSYK AEIFGPVLQV VRVSTMREAM DIIDAHEYGN GTCIYTRDGE
AARYFSDHIK VGMVGINVPL PVPVAYHSFG GWKRSLFGDL HAYGPDAVRF YTRRKTVTQR
WPSANVREGA EFSMPTMK
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