| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0413 |
|---|
| Symbol | |
|---|
| ID | 5108335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 434805 |
|---|
| End bp | 436208 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640501629 |
|---|
| Product | adenosylmethionine--8-amino-7-oxononanoate transaminase |
|---|
| Protein accession | YP_001185918 |
|---|
| Protein GI | 146305453 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA ACGACCACTG GATGCAGCGC GACCTCAACG TGCTGTGGCA CCCCTGCACG
CAGATGAAGG ATCACGAGCG CCTGCCGCTG GTGCCCATTC GCAGGGCCTC GGGGGTCTGG
CTGGAGGACT TCGACGGCAC GCGCTATCTC GATGCGGTGA GCTCCTGGTG GGTCAATGTG
TTCGGCCACG CCAACCCGCG CATCAACCAG CGGATCAAAG ATCAGTTGGA GAATCTGGAG
CACGTGATGC TCGCAGGCTT CACCCACGAG CCGGTGATCG AACTGTCGGA GCGCCTGGTC
GCCATCACCC CGGCCGGCCT GAACAAGGTG TTCTACGCCG ACAACGGCTC CTCGGGCATC
GAGGTGGCGC TGAAGATGAG CTTTCACTAC TGGCTCAACA ACGGCCAGGC GAACAAGAAG
CGCTTCGTCA CCCTGAGCAA CAGTTATCAC GGTGAAACCG TGGCAGCGAT GTCGGTGGGC
GACGTGTCGC TGTTCACCGA CACTTACAAG CCGCTGCTGC TCGACACCCT CAAGGTGCCC
AGCCCAGACT GTTACCTGCG CCCGGAAGGC GTGAGCTGGG AAGAGCATTC GCGCGTCATG
TTCGCCCACA TGGAACAGAC CCTGGCCGAG CATCACCACG AAGTCGCCGC GGTGATCGTC
GAGCCGCTGA TCCAGGGTGC CGGCGGCATG CGCATGTATC ATCCGGTCTA CCTCAAGCTG
CTGCGCGAGG CCTGCGACTG CTATGGCGTG CACCTGATCC ATGACGAGAT TGCCGTCGGC
TTCGGCCGCA CCGGCACGAT GTTCGCCTGC GAGCAGGCCG GCATTACCCC GGACTTCCTG
GTGCTGTCCA AGGCACTGAC CGGTGGTTAT CTGCCGATGG CGGCGGTGCT GACCACCGAT
CAGGTGTACA GCGCCTTCTA TGACGACTAC GCCACCCTGC GCGCCTTCCT CCACTCGCAC
ACCTACACCG GCAACCCGCT GGCCTGCGCC GCCGCGCTGG CGACGCTGGA TATCTTCCGT
GACGACGATG TGATCGAACG CAACAAGACC CTGGCGGCGC GTATGGCCAG CGCCACGGCG
CACCTGGCCG AGCACCCGCA TGTCGCCGAA GTGCGCCAGA CCGGCATGGC CCTGGCCATC
GAGATGGTTG CCGACAAGGC CGGCAAGACG GCCTACCCCT GGCAGGAGCG ACGCGGTCTG
CGTGTCTATC AGCACGCACT GGAACGTGGC GCGTTGCTGC GCCCACTGGG CAGCGTGGTG
TATTTCCTGC CGCCTTACGT CATCACGCCC GAGCAGATCG ACTTCCTGGC CGAGGTGGCC
AGCGAGGGTA TCGATATCGC CACACGCTCG TCCGTCAGCG TGGCCGTGGA TGACCGCTTT
CCCGATCATC GCGATCCGGG TTGA
|
|---|
| Protein sequence | MSLNDHWMQR DLNVLWHPCT QMKDHERLPL VPIRRASGVW LEDFDGTRYL DAVSSWWVNV
FGHANPRINQ RIKDQLENLE HVMLAGFTHE PVIELSERLV AITPAGLNKV FYADNGSSGI
EVALKMSFHY WLNNGQANKK RFVTLSNSYH GETVAAMSVG DVSLFTDTYK PLLLDTLKVP
SPDCYLRPEG VSWEEHSRVM FAHMEQTLAE HHHEVAAVIV EPLIQGAGGM RMYHPVYLKL
LREACDCYGV HLIHDEIAVG FGRTGTMFAC EQAGITPDFL VLSKALTGGY LPMAAVLTTD
QVYSAFYDDY ATLRAFLHSH TYTGNPLACA AALATLDIFR DDDVIERNKT LAARMASATA
HLAEHPHVAE VRQTGMALAI EMVADKAGKT AYPWQERRGL RVYQHALERG ALLRPLGSVV
YFLPPYVITP EQIDFLAEVA SEGIDIATRS SVSVAVDDRF PDHRDPG
|
|---|
| |