Gene Pmen_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0371 
Symbol 
ID5108293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp385089 
End bp386006 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID640501587 
Producthypothetical protein 
Protein accessionYP_001185876 
Protein GI146305411 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCA GAGCCCATCA CGTGCTGATC GGCCTGTTCA CCGTGCTCAC GGTGGGCGCC 
GCGCTGCTGT TCGCCCTGTG GCTGAACAAG GCCGGTGCCG ATCGCGCCTT CACCGATTAC
GAGGTGATCT TCAACGAAGC TGTCAGCGGC CTGTCGCAAG GCAGCGCGGT GCAGTACAGC
GGGATCAAGG TCGGCGACGT GATCAGCCTC GGCCTCGACC CGGAAGATCC GCGCACGGTG
CGCGCGCGCA TCCGCATCGC CGGCCATACG CCGATCAAGC AGGACACCCG GGCGCGCCTG
TCGATCACCG GCATCACCGG CCTGGCCGTG ATCCAGCTGT ACAGCGGCAG CCCGGAAAGC
CCGCCGCTGG AAGGCAAGGA TGGTCAGCCC GGGATCATCA TCGCCGACCG CTCGCCGCTT
TCCCGGCTGA TGGCCAACGG CGAGGACCTG GTGAGCAACA TCACCCGCCT GCTCAACCGC
GCCAACCGCA TGCTCTCGCG CGAGAATGCC GAGCGCGTCT CGCGCACCCT GGAGAACCTG
GAGCAGGCCA CGGCCGGTAT CGCCAGCCAG CGCGACGAAC TCAGCGCCGC TTTGCAGCAG
GCCGGCGCCG CCACCCGCGA AGCGGCCGAA CTGATGCGCA CCGCCAACCG CCTGCTCGAC
GGCCAGGGTA GCCAGGCCCT GGACAACGCC GAACGCCTGA TGGCCTCGCT GGAGCGCAGC
AGCCGCAGCA TCGAGCAGTT GCTGGAAAGC AACCGCAGCG CCCTGGACAG CGGCATGCAG
GGCCTCGGCG AACTGGGCCC GGCGATTGGC GAGCTGCGCG ACACCCTCAG CGCCCTGCGC
GGCTTCTCCC GTCGCCTGGA ACAGGACCCC ACCGGCTACC TGCTGCGCAG CGACAGCATC
AAGGAGTTCC AACCATGA
 
Protein sequence
MEPRAHHVLI GLFTVLTVGA ALLFALWLNK AGADRAFTDY EVIFNEAVSG LSQGSAVQYS 
GIKVGDVISL GLDPEDPRTV RARIRIAGHT PIKQDTRARL SITGITGLAV IQLYSGSPES
PPLEGKDGQP GIIIADRSPL SRLMANGEDL VSNITRLLNR ANRMLSRENA ERVSRTLENL
EQATAGIASQ RDELSAALQQ AGAATREAAE LMRTANRLLD GQGSQALDNA ERLMASLERS
SRSIEQLLES NRSALDSGMQ GLGELGPAIG ELRDTLSALR GFSRRLEQDP TGYLLRSDSI
KEFQP