| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0351 |
|---|
| Symbol | |
|---|
| ID | 5108273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 360139 |
|---|
| End bp | 360816 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640501567 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001185856 |
|---|
| Protein GI | 146305391 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATCA ATCCCTTTGT CAGCCTGTTC GGCCGTTCAC CCATCGGCCC GATGCAACAG
CATATCGCCA AGGCCCACGA GTGCGCGGCG AACCTGGTGC CCTTCTTCGA GGCCGTGATG
GCCGAGGACT GGGCCACGGT GGAACAGGTG CAACAGGAGA TGTCCCGGCT GGAGCATGAG
GCCGACAAGC TGAAGAAAAG CGTGCGCCTG CACCTGCCCA AGAGCCTGTT CCTGCCGGTG
CCGCGTTCGG ATCTGCTGGA GCTGCTCAGT GTACAGGACA AAGTCGCCAA CCGTGCCAAG
GACATCGCCG GGCTGATGCT CGGCCGTCAG ATGGCCATTC CGCAGGCCCT GCAGCCGCTG
ATGCGCACCT ACGTGCAGCG CAGCGTCGAC GCCAGCGCCC AGGCGCTGAA GGCGATGAAC
GAATTGGACG AGCTGCTCGA GACCGGTTTC GCCGGCCGTG AAGCGGTGCT GGTGGAAACC
CTGATCGAGG AGCTCGGTTC GATCGAAAAC GATACCGACC GCCTGCAAAT CGAGGTGCGC
CGCAACCTGT TCAAGCTGGA GAAGGACCTT CCCCCCGTCG ATGTGATGTT CCTCTATCAG
ATCATCGACT GGGTCGGCGA TGTCGCCGAC CGTGCCCAGC GAGTGGGCAA CCGACTGGAA
CAACTGCTGG CGCGCTAA
|
|---|
| Protein sequence | MPINPFVSLF GRSPIGPMQQ HIAKAHECAA NLVPFFEAVM AEDWATVEQV QQEMSRLEHE
ADKLKKSVRL HLPKSLFLPV PRSDLLELLS VQDKVANRAK DIAGLMLGRQ MAIPQALQPL
MRTYVQRSVD ASAQALKAMN ELDELLETGF AGREAVLVET LIEELGSIEN DTDRLQIEVR
RNLFKLEKDL PPVDVMFLYQ IIDWVGDVAD RAQRVGNRLE QLLAR
|
|---|
| |