| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0346 |
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| Symbol | |
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| ID | 5110315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 354494 |
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| End bp | 355585 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640501562 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001185851 |
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| Protein GI | 146305386 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.596503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAGTTA CCCTGCCCAA GTCTCTGATC GCCCTGGCGG CCTCCGCCGT CTGTGGTGTG
GCCCTGGCCC AGCCGAAGGT GCACATCTAC AACTGGAGCG ACTACATCGG CGAAGAGACC
CTGGCCAAGT TCGAGGCGCA AACCGGCATC AAGCCGATCT ACGACGTCTT CGACTCAAAC
GAAACCCTCG AAGGTAAACT GCTCGCCGGT CGCAGTGGCT ATGACGTGGT GGTGCCGTCC
AACCATTTCC TCGGCAAGCA GATCCGTGCC GGCGCCTTCC AGCCGCTCGA CCGCGCCAAG
CTGCCGAACT GGGACAATCT GGACCAGGCA TTGCTCAAGC AGCTGGAAAC CAACGACCCC
GGCAACCAGT ACTCGGTGCC GTACCTGTGG GGCACCAACG GCATCGGTTA CAACGTGGAG
AAGATCAAGG CCGTTCTGGG CGTCGAGGAG ATCGACTCCT GGGCCGTGCT GTTCGAAGCC
GAGAACATCA AGAAGCTCAG CCAGTGCGGC GTGGCCTTCC TCGACTCGGC CGACGAGATG
ATCCCGGCCA TGCTCAACTA CCTGGGCCTG GACCCCAACA GCACCAACCC CGACGACTAC
GCCAAGGCCG AGGCCAAGCT GCTGGAGGTG CGCCCCTACG TCACCTACTT CCACAGCTCC
AAGTACATCG GTGATCTGGC CAACGGCAAC ATCTGCGTGG CAGCCGGCTT CTCCGGCGAC
ATTCTGCAGG CCGCCGACCG TGCCGAAGAG GCCGGCAAGG GTATCGAGAT CGCCTACGCC
ATTCCCAAGG AAGGCGCCAA CCTCTGGTTC GACATGCTGG CCATTCCGGC CGACGCGGCG
AACGTCGAGC AGGCCCATGC CTTCATCAAT TTCCTCCTCG ATCCGCAGGT GATCGCCGAC
GTCAGCAACT ACGTCGGCTA CGCCAACCCC AACACCAAGG CCGGTGAACT GATGGATCAG
GACGTACGCA ACGACCCGTC CGTGTACCCG CCACAAGCGG TACTGGACAA ACTGTACATC
TCTGCCGAAT TGCCGGTGCG TGTGCAGCGT CTGATGACTC GCGCCTGGAC CAAGGTCAAG
TCGGGTCAGT AA
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| Protein sequence | MRVTLPKSLI ALAASAVCGV ALAQPKVHIY NWSDYIGEET LAKFEAQTGI KPIYDVFDSN
ETLEGKLLAG RSGYDVVVPS NHFLGKQIRA GAFQPLDRAK LPNWDNLDQA LLKQLETNDP
GNQYSVPYLW GTNGIGYNVE KIKAVLGVEE IDSWAVLFEA ENIKKLSQCG VAFLDSADEM
IPAMLNYLGL DPNSTNPDDY AKAEAKLLEV RPYVTYFHSS KYIGDLANGN ICVAAGFSGD
ILQAADRAEE AGKGIEIAYA IPKEGANLWF DMLAIPADAA NVEQAHAFIN FLLDPQVIAD
VSNYVGYANP NTKAGELMDQ DVRNDPSVYP PQAVLDKLYI SAELPVRVQR LMTRAWTKVK
SGQ
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