| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0316 |
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| Symbol | |
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| ID | 5110286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 323506 |
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| End bp | 326211 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501533 |
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| Product | ABC transporter related |
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| Protein accession | YP_001185822 |
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| Protein GI | 146305357 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC CGGTCGCCCG CCTGAGCGGT GTCGGCCTGC GCTACGGCCA GACCCGCGCC
CTCGACGCCA TCGAGCTGGC GCTGCCGGCG CAGCGCATGG TCGGCCTGAT CGGCCCGGAC
GGCGTCGGCA AGTCCAGCCT GCTGGCGCTG ATCGCCGGGG CGCGCAAGAT TCAGGACGGC
AGCGTCGAGG TACTGGGCGG CGATATGGCC ACGGCGCACC ATCGCCGCAA CGTCTGCCCG
CATATCGCCT ATATGCCGCA GGGACTGGGC AAGAACCTCT ACCCGACGCT GTCGGTGTTC
GAGAACCTGG ATTTCTTCGG CCGTCTGTTC GGCCAGGACG CCGCCGAGCG CGAGCGGCGC
ATCGACGACC TGCTGCGCAG CACCGGCATG GCCGCCTTCC GCGAGCGCCC GGCGGGCAAG
TTGTCCGGCG GCATGAAACA GAAGCTCGGG CTGTGCTGCG CGCTGATTCA TGACCCGGAT
CTACTGATCC TCGACGAGCC GACCACCGGC GTCGACCCGC TATCACGCAA CCAGTTCTGG
GAGCTGATAG CGCGCATCCG CACGCAGCGC CCGCAGATGA GCGTGCTGGT GGCCACCGCC
TACATGGAGG AGGCCGAGCG CTTCGACCAT CTGGTGGCGA TGGATGCCGG CCGCGTGCTG
GCCGAAGGCA GCCCGGCCGA ACTGCGCACC CGCACCAGCA GCGCCAGCCT GGAGCAGGCC
TTTATCGCCC TGCTGCCCGA AGAACGCCGC CGCGGCCATC AGCAGGTGGT GATTCCGCCC
CTGCGAGACA GCAACGAGAT CGCCATCGAA GCCAAGGGCC TGACCATGCG CTTCGGCGAT
TTCATCGCGG TGGACGCGGT GTCGTTCCGC ATCCGCCGCG GCGAGATCTT CGGTTTTCTC
GGCTCCAACG GCTGCGGCAA GAGCACCACC ATGAAGATGC TCACCGGCCT GCTGCCGGCC
AGCGAGGGCG AGGCGCTGCT GTTCGGCCAG GCGGTGGATC CGCGCGACAT GGCCACGCGC
AAGCGCGTCG GCTACATGTC GCAGGCGTTC TCCCTGTACG GCGAGCTGAC GGTGCGGCAG
AACCTGGTGC TGCATGCCCA GCTGTTCCAT GTGCCGACCG CCGAGATCGA GCCGCGTGTG
GCGCAGATGG CCGTGCGCTT CGACCTCGGC GAGGTCATGG ACATGCTCCC CGAGCGTCTG
CCGCTAGGCA TTCGCCAGCG CCTGTCGCTG GCCGTGGCGG TGATCCACAA ACCGGAGATT
CTGATCCTCG ACGAGCCCAC CTCGGGCGTC GATCCGGTGG CCCGCGACGG CTTCTGGCAA
CTGATGCTCG ATCTGTCGCG CCAGGACGGC GTGACCATCT TCATCTCCAC CCACTTCATG
AACGAGGCGC AGCGCTGCGA CCGCATCTCG CTGATGCACG CCGGCCGCGT GCTGGACAGC
GACACGCCGC AGGGGCTGAT GGAAAAACGC GGGCTGGACA GTCTGGAGGC CACCTTCATC
GCCTACCTGC AGGAGGCGGT CGGCGAACAG CCGGTCAGCG AAGCGCCGCC CCTGGAACAG
GCCGCTCAGC CGCAGCGTCA GCACTTCAGC CTGCGCCGTC TGCTCAGCTA TGCCCGGCGC
GAGGCGCTGG AGCTGCGCCG CGACCCGATT CGCGGCGGCA TGGCCCTGCT CGGTACGGTG
TTGCTGCTGT TTATCATCGG CTACGGCATC AGCCTCGATG TGGAGGATCT GAGCTTCGCC
GTGCTCGATC GCGACCAGAC CACCACCAGC CAGGAATACC ACCGCAACCT CTCCGGCTCG
CGCTACTTCC TGGAGAAGGC GCCGCTCTCC AATTACGACG AACTGGAACG ACGCCTGCGC
AATGGCGACA TCAGCCTGGC GGTGGAGATT CCGCCGCACT TCGGCCGCGA CCTCAAGCGT
GGCGCCAGCC CGCAGATCGG CATGTGGATC GATGGCGCCA TGCCGACCCG CGCCGAAACC
ATCAAGGGTT ACGTCAGCGG CCTGCATCAG CATTACCTGA GCGAGCTGGC GCGCCGCTCG
CCGCAGCCGC AGGCGGCCAA CGCCGCCACG CTTGCGGTGC GCTATCGCTA CAACCCGGAC
GTGGAGAGCC TCAAGGCCAT GGTGCCGGCG GTGATTCCGC TGCTGCTGAT GCTGATTCCG
GCGATGCTCA CGGCCCTCGG CGTGGTGCGC GAGAAAGAGC TGGGTTCGAT CATCAACCTC
TACGTCACGC CGGTCACCCG CCTGGAATTC CTGCTCGGCA AGCAGTTGCC CTATATCGGC
CTGGGCCTGT TCAACTGCGC CCTGCTGGTG CTGCTGGCGG TCACGGTGTT CGACGTGCCG
CTCAAGGGCA GCCCCTTCAC CCTCGCGCTC GGCGTCCTGC TCTATCTGGC CTGCGCCACC
GGCCTCGGCC TGCTCATGTC GACCTTCACC AACAGTCAGA TCGCCGCCGT GTTCGGCACC
GCCATCGCCA CCCTGGTGCC GGCCATCCAG TTCTCCGGGC TGATCTATCC GGTGGCCTCG
CTGGAAGGGA TCGGCGCCCT GGTCGGCCAG CTCTACCCGA CCTCGCAGTT TCTGGTGATC
AGCCGCGGGC TGTTCTCCAA GGCGCTGGAG CTGCAGGACA TGCTCGGCTA CTTCGCCGCC
TTGCTGCTGA CCATCCCGCT GCTGACTCTG CTCAGCGCCA GTCTGCTGCG CAAACAGGAG
GTCTGA
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| Protein sequence | MNAPVARLSG VGLRYGQTRA LDAIELALPA QRMVGLIGPD GVGKSSLLAL IAGARKIQDG
SVEVLGGDMA TAHHRRNVCP HIAYMPQGLG KNLYPTLSVF ENLDFFGRLF GQDAAERERR
IDDLLRSTGM AAFRERPAGK LSGGMKQKLG LCCALIHDPD LLILDEPTTG VDPLSRNQFW
ELIARIRTQR PQMSVLVATA YMEEAERFDH LVAMDAGRVL AEGSPAELRT RTSSASLEQA
FIALLPEERR RGHQQVVIPP LRDSNEIAIE AKGLTMRFGD FIAVDAVSFR IRRGEIFGFL
GSNGCGKSTT MKMLTGLLPA SEGEALLFGQ AVDPRDMATR KRVGYMSQAF SLYGELTVRQ
NLVLHAQLFH VPTAEIEPRV AQMAVRFDLG EVMDMLPERL PLGIRQRLSL AVAVIHKPEI
LILDEPTSGV DPVARDGFWQ LMLDLSRQDG VTIFISTHFM NEAQRCDRIS LMHAGRVLDS
DTPQGLMEKR GLDSLEATFI AYLQEAVGEQ PVSEAPPLEQ AAQPQRQHFS LRRLLSYARR
EALELRRDPI RGGMALLGTV LLLFIIGYGI SLDVEDLSFA VLDRDQTTTS QEYHRNLSGS
RYFLEKAPLS NYDELERRLR NGDISLAVEI PPHFGRDLKR GASPQIGMWI DGAMPTRAET
IKGYVSGLHQ HYLSELARRS PQPQAANAAT LAVRYRYNPD VESLKAMVPA VIPLLLMLIP
AMLTALGVVR EKELGSIINL YVTPVTRLEF LLGKQLPYIG LGLFNCALLV LLAVTVFDVP
LKGSPFTLAL GVLLYLACAT GLGLLMSTFT NSQIAAVFGT AIATLVPAIQ FSGLIYPVAS
LEGIGALVGQ LYPTSQFLVI SRGLFSKALE LQDMLGYFAA LLLTIPLLTL LSASLLRKQE
V
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