| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0296 |
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| Symbol | |
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| ID | 5110266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 303387 |
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| End bp | 304046 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501513 |
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| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
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| Protein accession | YP_001185802 |
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| Protein GI | 146305337 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AAGTGGCAGT GATTCTGTCC GGCTGTGGCG TCTACGACGG CGCCGAGATC
CATGAAAGCG TGATCACCCT GTTGCGCCTC GACCAGCGCG GCGCAGTGGT GCAGTGCTTC
GCTCCCAACG TGCCGCAACT GCACGTGGTC GATCACTACA GCGGCGACGA GATGGACGAA
ACGCGCAACG TGCTGGTGGA ATCGGCGCGC ATCGCCCGCG GCAAGATCAA GGACGTCAAG
GAGCTGCACG TGGCCGAGTT CGACGCACTG ATCCTGCCCG GCGGCTTCGG CGTGGCCAAG
AACCTCTCCG ACTTCGCCAC CAGCGGCGCG GGCTGCACCG TGCAGCCGGA CGTGCTGGCC
GCCTGCAAGG CCTTCGTCGA CGCCGGCAAG CCGGTCGGCC TGATGTGCAT CGCGCCGGCG
CTGGCGGCGA AGATCTTTGG CGCTGGCGTG ATCTGCACCA TCGGCACCGA CCACGACACC
GCCGCCGCCC TGACCCAGAT GGGCGCCGAG CACCACGAGT GCGAAGTCAG CGACATCGTC
GAGGATCATG CTCGCAAGCT GGTCACCACA CCGGCCTACA TGCTCGCCCA GTCCATCGCC
GAGGCGGCTT CGGGCATCAA CAAGATGGTC GACCGCGTGC TGGAGCTGGC GCACCACTGA
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| Protein sequence | MSKKVAVILS GCGVYDGAEI HESVITLLRL DQRGAVVQCF APNVPQLHVV DHYSGDEMDE
TRNVLVESAR IARGKIKDVK ELHVAEFDAL ILPGGFGVAK NLSDFATSGA GCTVQPDVLA
ACKAFVDAGK PVGLMCIAPA LAAKIFGAGV ICTIGTDHDT AAALTQMGAE HHECEVSDIV
EDHARKLVTT PAYMLAQSIA EAASGINKMV DRVLELAHH
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