| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0249 |
|---|
| Symbol | |
|---|
| ID | 5106216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 257104 |
|---|
| End bp | 257514 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640501466 |
|---|
| Product | cytochrome c5-like protein |
|---|
| Protein accession | YP_001185755 |
|---|
| Protein GI | 146305290 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3245] Cytochrome c5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TGCTGGCAGT ACCGGCTGCC GTATTGGCCC TGTGGGCAGT GACTGCTCAG
GCCACGACCG ATGAAGCCAT CGCCGAGCGC CTCAAGCCGG TGGGCGAAGT GTGCATCATG
GGTGAAGAAT GCAAGGGCGT CGGCGCCGTT GCCGTGGCCG CTGGCGGCGC ACGCAGCACC
GACGACATCA TCGCCAAGCA CTGCAACGCC TGCCATGCCG CCGGCGTGCT GGGCGCGCCG
AAGATCGGCG ACACCGCTGC CTGGAAAGAG CGTGCCGACC ATCAGGGTGG CCTCGACGGC
ATCCTCGCCG CTGCCATCTC CGGCATCAAC GCCATGCCGC CGAAAGGCAC CTGCGCCGAT
TGCTCGGAAG ACGAACTGCG CGACGCGATC AAGAAGATGT CCGGTCTGTA A
|
|---|
| Protein sequence | MKKMLAVPAA VLALWAVTAQ ATTDEAIAER LKPVGEVCIM GEECKGVGAV AVAAGGARST
DDIIAKHCNA CHAAGVLGAP KIGDTAAWKE RADHQGGLDG ILAAAISGIN AMPPKGTCAD
CSEDELRDAI KKMSGL
|
|---|
| |