Gene Pmen_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0244 
Symbol 
ID5106211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp252765 
End bp253253 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID640501461 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001185750 
Protein GI146305285 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC AGCATCAAAG CCGTCGTGAA CTGGACAAGA TCGACCGCAA CATCCTCCGT 
ATCCTGCAGG AGGACGGGCG CATCAGCTTT ACCGAACTGG GCGAGCGCGT GGGCCTGTCC
ACCACGCCCT GCACCGAGCG CGTCCGCCGT CTGGAGCGCG AAGGCATCAT CATGGGCTAC
CACGCCCGCC TCAACCCGCA GCAGCTCAAG GCCAACCTGC TGGTGTTCGT CGAGATCAGC
CTGGACTACA AGTCCGGCGA CACCTTCGAG GAATTCCGCC GCGCCGTACT CAAGCTGCCG
CACGTGCTGG AATGCCACCT GGTGTCCGGC GACTTCGACT ACCTGGTGAA GGCGCGGATC
AACGAGATGG CCAGCTACCG CAAGCTGCTC GGCGACATCC TGCTCAAGCT GCCGCACGTG
CGCGAGTCGA AGAGCTACAT CGTCATGGAA GAGGTGAAGG AGTCGTTGGC GCTGCCGGTG
CCGGATTGA
 
Protein sequence
MRTQHQSRRE LDKIDRNILR ILQEDGRISF TELGERVGLS TTPCTERVRR LEREGIIMGY 
HARLNPQQLK ANLLVFVEIS LDYKSGDTFE EFRRAVLKLP HVLECHLVSG DFDYLVKARI
NEMASYRKLL GDILLKLPHV RESKSYIVME EVKESLALPV PD