Gene Pmen_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0236 
Symbol 
ID5106203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp244394 
End bp244753 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content64% 
IMG OID640501453 
Productprotein of unknown function DUF861, cupin_3 
Protein accessionYP_001185742 
Protein GI146305277 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG AGCAGATCGT CGACTTCGCC CAGGCCGCCA CGGCCGCCGA CCACTATCGC 
CCCGCCCCGG AGAAAGTGCT CAAGGGCGAC CCCGAGCAGA GCGTGCGCAA CCACTACGGC
AGCCCCTGTG GCCAGTTCAG CAGCGGCATC TGGGAAGGCG CGGTGGGCCA GTGGACGGTG
AACTACACCG AGCATGAATA CTGCGAGATT CTCCAGGGTG TTTCCGTATT GCGCGATGCC
GATGGCAACG CCAAGACCGT ACGCGCCGGC GACCGCTTCG TCATCCCTGC CGGCTTCTCC
GGTACCTGGG AGGTGCTGGA AGCCTGCCGC AAGGTCTATG TGATCTTCGA GCCCAAGTAA
 
Protein sequence
MNIEQIVDFA QAATAADHYR PAPEKVLKGD PEQSVRNHYG SPCGQFSSGI WEGAVGQWTV 
NYTEHEYCEI LQGVSVLRDA DGNAKTVRAG DRFVIPAGFS GTWEVLEACR KVYVIFEPK