| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0209 |
|---|
| Symbol | |
|---|
| ID | 5106176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 211137 |
|---|
| End bp | 212324 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640501425 |
|---|
| Product | flagellar basal body FlaE domain-containing protein |
|---|
| Protein accession | YP_001185715 |
|---|
| Protein GI | 146305250 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.676304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA ACATCGCCAT GACCGGCCTC AGTGCCGTCA ACGAACAGCT CAACACCATC
AGCCACAACA TCGCCAATGC CGGCACCACC GGCTTCAAGT CGTCGCGCAC CGAGTTCGGC
AGCATCTATG CCGACAGCCA GGCGATGGGC GTGGAAGTGC TGGCCACCAC CCAGAGCATC
AGCCAGGGTG GCTCCCTGGT GACCACCGGG CGCAGCCTGG ACCTGGCCAT CTCCGGCGGC
GGCTTCTTCG TCACCCGCGG CAGCAACGGT GACGTCAGCT ACACCCGCGC CGGCGTGTTC
GGTGCCGACA AGGACAACTA CATCGTCAAC GCCGCCGGCC TGAAGCTGCA GGGCTATCCG
GTGGACGCCG CCGGCAACCT GCTGGTCGGC GCCATGGGCG ACCTGCAGCT GCAGAACGCC
AACCTGCCGG CGCGCGCCAC CGACAGCCTG GCCTTCGTCA TGAACCTGGA TTCCAACCAG
AGCGTGCCGA CCGCTGCGCC CTTCGATCCG GCGGACGTCA ACACCTACAA CTCCACCTAC
ACCACCAAGG TGTTCGACTC CCAGGGCAAG GAACACACCC TGACCCAGTA CTTCGTCAAG
ACCGGCGACA ACGCCTGGGA AGCCCACTAC TACGCCGACG GCGCCGCCGT CGGTGGCCCG
CAGGCGCTGA CCTTCGGCAC CAACGGCAGC CTCACCGCGC CGGTCGGTCC GGTGGCCGTC
GGCTTCCCGC TGCCGGGTGT CGATCCGATG AACATCGCCA TCGACTACAG CAACTCCAGC
CAGTACGGCT CCGACTTCGT CGTCACCAGC AACCGCGCCA GCGGCTACGC GGCCGGCGAG
CAGACCGGCC TGTCGGTGGA GAAGGACGGC ATGGTCTACG CCAACTACAG CAACGGCCAG
CGCATGCTGC AGGGCCAGGT GGCGCTGGCC ACCTTCGCCA ACGCCGGTGG CCTGAAGAAC
GTCAGCGGCA CGGCCTGGGT GGAAAGCGCC GAGTCCGGCG CGGCGCTGAT CGGCGTGCCC
GGCGTCGGCC CGTTCGGCGA GCTGGTGGCC GGTTCGCTGG AGAACTCCAA CGTCGACCTG
ACCCAGCAGC TGGTCGGCCT GATGGAGGGC CAGCGCAACT ACCAGGCCAA CACCAAGGTG
CTGACCACCA ACAAGGAACT CACCCAAGTG CTGTTCGGCG CGATCTGA
|
|---|
| Protein sequence | MSFNIAMTGL SAVNEQLNTI SHNIANAGTT GFKSSRTEFG SIYADSQAMG VEVLATTQSI
SQGGSLVTTG RSLDLAISGG GFFVTRGSNG DVSYTRAGVF GADKDNYIVN AAGLKLQGYP
VDAAGNLLVG AMGDLQLQNA NLPARATDSL AFVMNLDSNQ SVPTAAPFDP ADVNTYNSTY
TTKVFDSQGK EHTLTQYFVK TGDNAWEAHY YADGAAVGGP QALTFGTNGS LTAPVGPVAV
GFPLPGVDPM NIAIDYSNSS QYGSDFVVTS NRASGYAAGE QTGLSVEKDG MVYANYSNGQ
RMLQGQVALA TFANAGGLKN VSGTAWVESA ESGAALIGVP GVGPFGELVA GSLENSNVDL
TQQLVGLMEG QRNYQANTKV LTTNKELTQV LFGAI
|
|---|
| |