Gene Pmen_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0193 
Symbol 
ID5106873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp195032 
End bp195973 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content67% 
IMG OID640501409 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001185699 
Protein GI146305234 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC GTGGCGGCGA AGAACACGAG ATCATCGTCA AGCGGCGCAG CAAGAAGGGC 
GGCCACGACG AACATGGCGG TGCCTGGAAA GTGGCCTTCG CCGATTTCAC CATGGCCATG
ATGGCGTTGT TCATGGTGCT GTGGATCATC CAGCCGCAGA ACCAGCAGCA GAGCCGCGCC
GATGCCGACC AGCTGACCAA TCCCCTGGTC GAGGGCGGTG CCGGCATCTT CGACGGCAGC
AGCCGCACGC CGCTGGATCT CGATGGCGTA CCGGTGCAGG TCAGCCCGCG CAAGGACCGC
GACAACCAGG CGCGTACGCC GCAGGAGGAT CCCGGTGCCA CCCTCGGCGA AGGCCAGCCG
GGTGAGCCGC GCCGCCCTCA CTACGCCGAA CCGGGCCAGA TGCAGGAACT CGCCGAGTTG
CTGGAGCAGC TGGCGCTGCA GCTGGACGCC GAAGCCAATA TCGAGGTGCA GGTGGTACCG
CAGGGTCTGC GCATCCTGAT CAAGGACGAC GCCCAGCGCT TCATGTTCAG TCGTGGCAGC
GCGCGTCTGG ATCCGCACTT CGAGAAACTG CTGCAGCGCC TGGCCGGCAT TCTGGCCAAG
GTGGACAACC ACCTGATCAT CAGCGGGCAC ACCGATTCCA CGCCCTATCG CGGTGTGGTT
GGCGGCTACA ACAACTGGAA CCTGTCCGGC GACCGTGCCC TGCGCGCGCG CAACGTGCTG
GTCGAGGCCG GCCTGCCCAC CTCCGCCGTG CTCCAGGTGA CCGCCCAGGC CGATGGCATG
CCGCTGTTGC CGAGCGATCC GCAGAACGGC GCCAACCGCC GCATCGAACT GCTGCTGCTG
ACCAGCCAGG CCGAAGGCCT GTACCGCGAG CTGTTCGGCG ATGCCCAGGT GCGGGTGGAC
TATCGCGAAG GCGGCGCGCA GTTCAACGCG CCGGGATCGT AG
 
Protein sequence
MRKRGGEEHE IIVKRRSKKG GHDEHGGAWK VAFADFTMAM MALFMVLWII QPQNQQQSRA 
DADQLTNPLV EGGAGIFDGS SRTPLDLDGV PVQVSPRKDR DNQARTPQED PGATLGEGQP
GEPRRPHYAE PGQMQELAEL LEQLALQLDA EANIEVQVVP QGLRILIKDD AQRFMFSRGS
ARLDPHFEKL LQRLAGILAK VDNHLIISGH TDSTPYRGVV GGYNNWNLSG DRALRARNVL
VEAGLPTSAV LQVTAQADGM PLLPSDPQNG ANRRIELLLL TSQAEGLYRE LFGDAQVRVD
YREGGAQFNA PGS