Gene Pmen_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0189 
Symbol 
ID5106869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp191848 
End bp192906 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content70% 
IMG OID640501405 
Productflagellar hook-length control protein 
Protein accessionYP_001185695 
Protein GI146305230 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.511537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCAGT CGATCAATCC GAGCGTCCAG GTCAGCCTGA GCGGTTCCGC TGTCGAGACC 
TTGCCGGCCG GCTTCGCCGA GGCGCAGGCA GGCAGCGGCC AACTGCAGGC CTTCGACCTG
CAGCTGGCAC TGCACGGCTT CAGCGCTGCC GAGGCGAGCA CGCCGCTGGA GCAGGACCCT
GTACCCGCTA AGGCGCCGCT CGTCGAAGCG GATGCCGAGC AGTGGCTGGC CGGCATGCTC
GGTCAGCAGG CCGTGCGCGT GGAGGCGCGC GAGGTGCCCG AGCAGCCCGA GCAGGCTCAG
CCCACGGACG ACATTCGCGA TCCGCAGGCG GTGCCGCTGG CTGCGGTCCT GCTGCCGCAG
CATGAGCCAG CCGTGGTGGC GCCTGCGCCG GCGCTCGAGG GGCTGAGCGA AGCGCGTCAG
CCCGCGCCTG CCATGCAGCG CACGACGGTG ATGACACTGC CGCTCGCGGC GGAGGGCACC
GGCCAGCTGC CGTCGCCGCT TGCCCTGACT GACGAGGCGC CTGAGGTGCT GGAGCGCCTG
CCGGGCGCCG TGGAAAGCGA CAAACCCGCA GCCGGCGGCG CACCCGCCAC CCAGGCCGGC
GCGCAGCCCC TGACGGCCGA GCGCAGCCTC AAGCTGCCGG TAGCGCAGGC ACAGTGGGGC
GAGCAGATGC TGCACAGCCT GCGCGAGCAG GTCGAGCTGC AGATCAACCA GCGTATCCAG
AACGCCACCA TCCGCCTCGA TCCGCCGGAG CTGGGCAGTC TGGAAATTTT CCTCAGCCAT
GAGTCCGGCC GTCTCAACGT GCAGCTTTCT GCGGCCAATG GCGAGGTGGC CAGGCTGCTG
CAGCAGATCA GCGAGCGTCT GCGTCAGGAG CTGGTCGGGC AGAACTTCGT GCAGGTCAAC
GTACAGGTCT CCGCCGATGC TCAGGGCGGT CGTCAGCAGC AACAGGCGCA AGCGCAGCGC
TGGCTCGTCG AGGATGAGGT GGCCGCTGCC GTCGCGCTAC CCGCCAGCGG CGAGCGCAAT
GGCGCGCAAT CGACCAGCGA TGTGCTGGTC ACCGTTTAA
 
Protein sequence
MLQSINPSVQ VSLSGSAVET LPAGFAEAQA GSGQLQAFDL QLALHGFSAA EASTPLEQDP 
VPAKAPLVEA DAEQWLAGML GQQAVRVEAR EVPEQPEQAQ PTDDIRDPQA VPLAAVLLPQ
HEPAVVAPAP ALEGLSEARQ PAPAMQRTTV MTLPLAAEGT GQLPSPLALT DEAPEVLERL
PGAVESDKPA AGGAPATQAG AQPLTAERSL KLPVAQAQWG EQMLHSLREQ VELQINQRIQ
NATIRLDPPE LGSLEIFLSH ESGRLNVQLS AANGEVARLL QQISERLRQE LVGQNFVQVN
VQVSADAQGG RQQQQAQAQR WLVEDEVAAA VALPASGERN GAQSTSDVLV TV