| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0172 |
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| Symbol | |
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| ID | 5106852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 173018 |
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| End bp | 174205 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501388 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_001185678 |
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| Protein GI | 146305213 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGGA AGATTGAAGC CAAGGTGCTG ATCGTCGACG ACCTGCCGGA GAACCTGCTG
GCCCTGCGCT CGCTGATCCA GAGCGACGAT CGCACGCTGT TCCAGGCCAG CAGCGCCGAC
GAGGCGCTGT CGCTGATGCT CGAGCATGAG TTCGCCCTGG CCATCCTCGA TGTGAAGATG
CCGGGCATGA ATGGTTTCGA ACTGGCCGAG CTGATGCGCG GAACGGAGAA GACCCGGCAT
ATCCCGATCA TCTTCGTCAG CGCCGTCGGC CGCGACATGG ACTATGCCTT CAAGGGCTAC
GAGAGCGGCG CCGTGGATTT CCTGCACAAG CCGCTGTCGC CCTTCGAGGT GCGCAGCAAG
GTGTCGATGT TCGTCGAGCT GTACCGTCAC CGCAAGGCGC TGAGCCAGCA GCTGGAAGTG
CTCGAGGCCG CGCGGCGCGA ACAGGAGGCC CTGCTCACCG AGCTGCGCGA GACCCAGGCC
GAGTTGCAGA AGGCGGTGCA GATGCGCGAC TCGTTCATGT CCATCGCCTC CCACGAGCTG
CGTACCCCGC TCAATGGCCT GATCCTCGAC GTGCAGCTGC GCAAGCTGCG CCTGGAGCAG
GGCCGCACGG ATGCCTTCAC CCCGGACAAG CTGCACGAGA TGATCGCCCG CGACGAGCGA
CAGATCCGCA GCCTGAGCCG CCTGATCGAC GACATGCTGG ACGTGTCGCG CATTCGCACC
GGCAAGCTTT CGGTGATACC CCAGCCGGGA GACCTCGGCG TACTGGCCGG CAACGTCGTG
GAGGGTCTGG CCGCGCAGTT CGCCAGTCAG GGCAACCACA TCGACCTGCA GGTGGACGGC
CCCGCGCCGG TGATGATGGA CGAGTTCCGC ATCGAGCAGG TGCTGGCCAA CCTGCTGACC
AACGCCCTGC GCTACGGAGG CGGCAAGCCC GTGCTGGTGC GGGTCAGCAG CGAGGGCGAG
ATCGTCCGCG CCGAGGTGCG CGACCAGGGC ATGGGCATTT CCGAAGCGGA CCAGCGACGG
GTGTTCGAGC AGTTCGAGCG GGTCTGCGAC GCCGGTGTCG CCCAGGGGCT CGGGCTCGGC
CTGTTCATCA GCGAGCAAAT CGTGCAGGCC CACGGAGGGC GCATCGAACT GAGCAGCCGC
CTGGGTGAGG GCTCCTGCTT CAGCGTCCTG CTACCGCGCC GCGTCTGA
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| Protein sequence | MLRKIEAKVL IVDDLPENLL ALRSLIQSDD RTLFQASSAD EALSLMLEHE FALAILDVKM
PGMNGFELAE LMRGTEKTRH IPIIFVSAVG RDMDYAFKGY ESGAVDFLHK PLSPFEVRSK
VSMFVELYRH RKALSQQLEV LEAARREQEA LLTELRETQA ELQKAVQMRD SFMSIASHEL
RTPLNGLILD VQLRKLRLEQ GRTDAFTPDK LHEMIARDER QIRSLSRLID DMLDVSRIRT
GKLSVIPQPG DLGVLAGNVV EGLAAQFASQ GNHIDLQVDG PAPVMMDEFR IEQVLANLLT
NALRYGGGKP VLVRVSSEGE IVRAEVRDQG MGISEADQRR VFEQFERVCD AGVAQGLGLG
LFISEQIVQA HGGRIELSSR LGEGSCFSVL LPRRV
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