Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0163 |
Symbol | |
ID | 5106843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 163250 |
End bp | 164761 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640501379 |
Product | uracil-xanthine permease |
Protein accession | YP_001185669 |
Protein GI | 146305204 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCA CCCCTCAGCG CCCCGAGGAC GAGAACCTCG GTATCGGCTC CAATCTTCTC TACGGCCTAC AGCACGTACT GACCATGTAT GGCGGCATCG TCGCGGTGCC CTTGATCGTC GGTCAGGCGG CCGGCCTGTC GCCTGCGGAC ATCGGCCTGC TGATCGCCGC CTCGCTTTTC GTCGGCGGCG CGGCCACCCT GCTGCAGACC CTGGGTCTGC CCTTCTTCGG CTGCCAGTTG CCGCTGGTGC AGGGCGTTTC CTTCGCCAGC GTCGCCACCA TAGTCGCGAT AGTCGGCGCC AATGGTGGCG AAGGCGGCCT GCCGGTGGTG TTCGGCGCGG TGATAGGCGC GGCGCTGATC GGTCTGCTGA TCACGCCGGT GTTCTCCAAG ATCACCAAGT TCTTCCCCCC GCTGGTGACC GGCATCGTCA TCACCACCAT CGGCCTGACG CTGATGCCGG TGGCCGCGCG CTGGGCCATG GGCGGCAACA GCGCAGCGGC TGACTTCGGC AGCATGGGCA ACATCGGCCT GGCGGCCTTC ACCCTGGCCA CGGTGCTGCT GCTGAGCAAG GTCGGCAGCG CCACCATCTC GCGTCTGTCG ATCCTGCTGG CGATGGTCAT CGGCACCCTG GTGGCGCTGG CCTTCGGCAT GGCCGACTTC TCCCGGGTCG GCGAAGGCCC GGTGCTGGCC TTCCCGGCGC CGCTGCACTT CGGCATGCCG GTATTCGAGG TGGCGGCGAT CGTCTCGATG CTGATCGTGG TGATGGTGAT CCTGGTGGAA ACCTCGGCCG ACATCCTCGC GGTGGGCGAC ATCATCGATA CCAAGGTGGA CTCCAAACGC CTCGGCAACG GCCTGCGCGC CGACATGATC GCCAGCATGG TGGCGCCGCT GTTCGGCTCC TTCACCCAGA GCGCCTTCGC CCAGAACGTC GGCCTGGTGG CCGTGACCGG GGTGAAAAGC CGCTACGTGG TGGCAACCGG CGGCCTGATT CTGGTCACCC TCGGCCTGCT GCCGATCATG GGCCGGGTCA TCGCCGCGGT GCCGACCTCG GTGCTGGGCG GCGCGGGTAT CGTGCTGTTC GGCACGGTCG CTGCCAGCGG TATCCGTACC CTGGCCAAGG TCGACTACCG CAACAACATG AACCTGGTGA TAGTCGCCAC CTCGGTCGGT TTCGGCATGA TCCCCATCGC CATGCCGAGC TTTTACCATC ACTTTCCGGA CTGGTTCGAG ACCATCTTCC ACTCCGGCAT CAGCTCGGCG GCGATCATGG CGATCCTGCT CAACCTGCTG TTCAACCATT TCACCGCGGG CAATTCCGAC CAGCAGTCGG TGTTCGTCGC CGGTACCGAG CGCAGCCTGC GCTATCGCGA CATCGCCGCC CTGCATGAGG GCGACCATTT CATCGGCGGC AAGCTGTATG ACGCACAGGG CAACGAGGTG CCGCTGCAGG ACGAGGAAGA GGCCCACGGC AAGACGCAGA CCAGACGGCA GGCAGCCTTG GCCGACCACT GA
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Protein sequence | MTSTPQRPED ENLGIGSNLL YGLQHVLTMY GGIVAVPLIV GQAAGLSPAD IGLLIAASLF VGGAATLLQT LGLPFFGCQL PLVQGVSFAS VATIVAIVGA NGGEGGLPVV FGAVIGAALI GLLITPVFSK ITKFFPPLVT GIVITTIGLT LMPVAARWAM GGNSAAADFG SMGNIGLAAF TLATVLLLSK VGSATISRLS ILLAMVIGTL VALAFGMADF SRVGEGPVLA FPAPLHFGMP VFEVAAIVSM LIVVMVILVE TSADILAVGD IIDTKVDSKR LGNGLRADMI ASMVAPLFGS FTQSAFAQNV GLVAVTGVKS RYVVATGGLI LVTLGLLPIM GRVIAAVPTS VLGGAGIVLF GTVAASGIRT LAKVDYRNNM NLVIVATSVG FGMIPIAMPS FYHHFPDWFE TIFHSGISSA AIMAILLNLL FNHFTAGNSD QQSVFVAGTE RSLRYRDIAA LHEGDHFIGG KLYDAQGNEV PLQDEEEAHG KTQTRRQAAL ADH
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