Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0151 |
Symbol | |
ID | 5106831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 150372 |
End bp | 151004 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640501367 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_001185657 |
Protein GI | 146305192 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGTA CTCATACCAC CGTTTTCGTT CTCGTTGCCA TCGTGGCGCT GGTGCTGGGC CTGACCGTCA ACAAGGTGCT CAACAGCAGG AGCCAGGGCG ACCCGGCGGC GCTGCTCGAT GCCGGCATCG TGCTGCTGCC GCAGAACCGC AGCCTGCCGG CGCTGACCCT GATCGATCAG GACGGCAAGG AGGTCGCGGT GGATCAGCTC AAGGGTGACT GGAAGCTGTT GTTCTTCGGC TACACCTTCT GCCCGGACAT CTGCCCGGCC ACCCTCGCCC AGCTGCGCCA GTTGCAGACG CAACTGCCTG AGGAAACCCG CGCGCGGCTG AAGGTGGTGA TGGTCAGCGT CGATCCCCAT CGGGACACGC CGGAGCAACT GAGCAAGTAC CTGAACTACT TCGACGCCGG CTTCAAGGGC CTGACCGGCG AGGAAGCGAC GCTGCAGAAA TTCGCCAATT CGGTGAGCAT CCCCTATATC CCGGCCGACA CCAGCAAGGA AAACTACACC GTCGATCACA GCGGCAATTT GGTGATCATC GGCCCGGATG GCACCCAGCG CGGCTTCATC CGCGCGCCGA TCAACAACGC CAAGCTGGCC GCGCAACTGC CGGGGCTGGT TTCAGGCTCG TAG
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Protein sequence | MTRTHTTVFV LVAIVALVLG LTVNKVLNSR SQGDPAALLD AGIVLLPQNR SLPALTLIDQ DGKEVAVDQL KGDWKLLFFG YTFCPDICPA TLAQLRQLQT QLPEETRARL KVVMVSVDPH RDTPEQLSKY LNYFDAGFKG LTGEEATLQK FANSVSIPYI PADTSKENYT VDHSGNLVII GPDGTQRGFI RAPINNAKLA AQLPGLVSGS
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