| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0129 |
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| Symbol | |
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| ID | 5106809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 130216 |
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| End bp | 131469 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501345 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001185635 |
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| Protein GI | 146305170 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.957581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGA GCAATACCGC TTCCCTTTCC CTGCTTGCGC GCGTGCCGCT GTGGCAGCAG
ATCCTCGTCG GCCTGGTGCT CGGCGTGGTG GTCGGCATGC TGTCCAAGAG CCTCGCCCTG
GCGCTGGCGC CGGTCGGCGC GCTGTTCCTC AATGCGATCA AGATGCTCAT CGTGCCGCTG
GTGTTCGTCT CCCTGGTGGC GGGCATCACC GCCATGAGCG ACAGCGCCAA GCTCGGCCGC
ATCAGCGTCA AGACCATCGC CATCTACCTG ATCACCACCG CCTTCGCGGT GAGCATCGGC
CTGGCCTTCG GCACCCTGTT CAGCCCCGGT GAGGGCATGA ACATGGTCGC CAGCGGCAGC
GAAGAGGCCA AGCAGGCGCC CTCGCTGGTG CAGATCCTGG TGGGGCTGGT GCCGACCAAT
CCGGTGACCG CCTTCGCCGA AGGCAACATC CTGCAGATCA TCGTCTTCGC CATCGCCCTG
GGCGTGAGCA TGAACCTGAT CGGCGAGAAG GCCGCGCCGG TGGCCAAGCT GTTCGACAGC
CTGGCCGAGG TGTTCTACAA GCTCACCGAC CTGGTGATGC GCTTCGCCCC CATCGGCGTG
TTCGCGCTGA TCGCCGGCGT GGTCGCTTCC CACGGCATCG AGGTATTGCT GCCGCTGGCC
GGGGTGATCG GGGTGATCTA CCTGGCCAGC ATCGCCCACA TGCTGCTGAT CTACGGCGGC
CTGATCGGCG GTCTGGCGCG CCTCAGCCCG CTGCGTTTCT TCCGCGGCAT CGCCCCGGCG
CTGGCAGTGG CCTTCAGTAC CTCGAGCAGC TCCGGCACCC TGCCGGTGTC CATCGAGTGC
GCGCGCAAGA ACCTCGGCGT ATCGCAGGGC GTGGCCGGCT TCGTGCTGCC GGTGGGCGCC
ACCATCAACA TGGACGGCAC CGCCATCTAC CAGGGCGTGC TGGCGCTGTT CATCGCCCAG
GCCTTCGGCA TCGACCTGAA TGCCGGCCAG TACCTGATGA TCATCCTCAC CGCCACCCTG
GCTTCGGTCG GCACCGCCGG CGTACCCGGC GCCGGCCTGA TCATGCTCGG CCTGGTGCTG
ACCTCGGTCG GCCTGCCGCT GGAAGGCGTG GCGCTGATCG CCGGTATCGA CCGCATCCTC
GACATGGCGC GCACCACGGT GAACGTCGCC GGTGACCTGA TGACCACCAC CCTGGTGGGC
AGCAGCGAGA AGGAGCTGGA TCGCGAGATC TACAACAGCG ACAACGCTGC CTGA
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| Protein sequence | MSQSNTASLS LLARVPLWQQ ILVGLVLGVV VGMLSKSLAL ALAPVGALFL NAIKMLIVPL
VFVSLVAGIT AMSDSAKLGR ISVKTIAIYL ITTAFAVSIG LAFGTLFSPG EGMNMVASGS
EEAKQAPSLV QILVGLVPTN PVTAFAEGNI LQIIVFAIAL GVSMNLIGEK AAPVAKLFDS
LAEVFYKLTD LVMRFAPIGV FALIAGVVAS HGIEVLLPLA GVIGVIYLAS IAHMLLIYGG
LIGGLARLSP LRFFRGIAPA LAVAFSTSSS SGTLPVSIEC ARKNLGVSQG VAGFVLPVGA
TINMDGTAIY QGVLALFIAQ AFGIDLNAGQ YLMIILTATL ASVGTAGVPG AGLIMLGLVL
TSVGLPLEGV ALIAGIDRIL DMARTTVNVA GDLMTTTLVG SSEKELDREI YNSDNAA
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