| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0128 |
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| Symbol | aspA |
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| ID | 5106808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 128663 |
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| End bp | 130087 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501344 |
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| Product | aspartate ammonia-lyase |
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| Protein accession | YP_001185634 |
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| Protein GI | 146305169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.266622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTG CTGCATCTGT TCGCGTCGAA AAAGACCTGC TCGGCACCCT CGAAGTCCCC
GCCGATGCCT ACTACGGCAT CCAGACCCTG CGCGCCGTGC AGAACTTCCG CCTGTCCGGC
GTGCCGCTGT CGCATTACCC GAAACTGGTG ATCGGCCTGG CCATGGTCAA GCAGGCCTCG
GCCGACGCCA ACCGCGAGCT GGGCCACCTG TCCGCGGCCA AGCACACGGC GATCAGCACC
GCCTGCGCAC GCATCATCCA GGGCGAGTTC CACGAGCAGT TCGTGGTCGA CATGATCCAG
GGCGGCGCCG GCACCTCGAC CAACATGAAT GCCAACGAGG TGATCGCCAA CATCGCCCTC
GAGGCCATGG GGCATGAGAA GGGCCAGTAC CAGCACCTGC ACCCGAACAA CGACGTGAAC
ATGGCGCAGT CGACCAACGA CGCCTACCCG ACCGCCATCC GTCTCGGCCT GCTGCTCGGC
CACGACAGCC TGCTCAGCGC GCTGGACAAG CTGATCCAGT CCTTCGCCGC CAAGGGCCTG
GAGTTCGGCC ACGTGCTGAA GATGGGCCGC ACCCAGCTGC AGGACGCCGT GCCGATGACC
CTCGGCCAGG AATTCCGCGC CTTCGCCACC ACCCTCGGCG AAGACCTGCA GCACCTGAAA
CTGCTGGCGC CGACCCTGCT CACCGAGGTG AACCTGGGCG GTACCGCCAT CGGCACCGGC
ATCAACGCCG ACCCGAAATA CCAGGCCCTG GCGGTCAAGC GCCTGGCCAT CATCAGCGGC
CACCCGCTGA CCCCGGCTGC CGACCTGATC GAAGCCACCA GCGACATGGG CGCCTTCGTG
CTGTTCTCCG GCATGCTCAA GCGCACCGCG GTCAAGCTGT CGAAGATCTG CAACGACCTG
CGCCTGCTCT CCAGCGGCCC GCGTACCGGC ATCAACGAGA TCAACCTGCC GGCGCGTCAG
CCGGGCAGCT CGATCATGCC GGGCAAGGTC AACCCGGTGA TCCCCGAGGC GGTCAACCAG
GTGGCCTTCG AAGTGATCGG CAACGACCTG GCGCTGACCA TGGCGGCCGA GGGCGGCCAG
CTGCAGCTGA ACGTGATGGA GCCGCTGATC GCCTACAAGA TCTTCGACTC GATCCGCCTG
CTCACCCGCG CCATGGACAT GCTGCGCGAG CTGTGCATCG ACGGCATCAC CGCCAACGAG
ACGCGCTGCC GCGAACTGAT GGAGAACTCC ATCGGTCTGA TCACCGCGCT CAACCCCTAC
ATCGGCTACG AGAACGCCAC CCGCATCGCC AAGGTCGCCC TGGAAAGCGG GCGCGGCGTA
CTGGAGCTGG TGCGCGAGGA GCAGCTGCTG GACGAGGCCA CCCTGGCCGA CATCCTGCGC
CCCGAGAACA TGATCGCCCC GCGTCTGGTT CCGCTGCAGG GCTGA
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| Protein sequence | MSSAASVRVE KDLLGTLEVP ADAYYGIQTL RAVQNFRLSG VPLSHYPKLV IGLAMVKQAS
ADANRELGHL SAAKHTAIST ACARIIQGEF HEQFVVDMIQ GGAGTSTNMN ANEVIANIAL
EAMGHEKGQY QHLHPNNDVN MAQSTNDAYP TAIRLGLLLG HDSLLSALDK LIQSFAAKGL
EFGHVLKMGR TQLQDAVPMT LGQEFRAFAT TLGEDLQHLK LLAPTLLTEV NLGGTAIGTG
INADPKYQAL AVKRLAIISG HPLTPAADLI EATSDMGAFV LFSGMLKRTA VKLSKICNDL
RLLSSGPRTG INEINLPARQ PGSSIMPGKV NPVIPEAVNQ VAFEVIGNDL ALTMAAEGGQ
LQLNVMEPLI AYKIFDSIRL LTRAMDMLRE LCIDGITANE TRCRELMENS IGLITALNPY
IGYENATRIA KVALESGRGV LELVREEQLL DEATLADILR PENMIAPRLV PLQG
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