| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0105 |
|---|
| Symbol | |
|---|
| ID | 5106290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 104713 |
|---|
| End bp | 105441 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640501321 |
|---|
| Product | protein phosphatase 2C domain-containing protein |
|---|
| Protein accession | YP_001185611 |
|---|
| Protein GI | 146305146 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.895672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCAG TCGTCAACGC CTGGCGCAGC GCCGCGCGCA CCGACACCGG CAAGGTGCGC
GCGCGCAACG AGGATGCCTT CCTGGCCCTG CCCGAGCAGG GCCTGTGGGT GGTGGCCGAC
GGCATGGGCG GGCACCAGAA CGGCGCCCTG GCCAGCCGCC TGATCGTCGA GCAGCTGGCC
GAGCTGGCGC AGGGCAGCCT GGAGCAGCGT CTGGTGGAGC TGCGTCAGGC GCTGCACCGG
CTCAATCATC GCCTCGGTCA GGAGCTGACG GTGACCGCCG ACCGCCCGGA CACGGTGATC
GGCAGCACCG TGGTCGCCCT GCTGCTCGAC GGCGACCGCG CCGCCTGCGT CTGGGCCGGT
GATAGCCGCT GCTACCTGTG GCGCGGTGCG CGTCTGTATC AGCTCAGCCG CGACCATTCA
CTGGTGCAGC AACTGATCGA CGAACAGGGC CTGACGCCGC AGGAGGCCGC GCGCCACCCG
GCGGCGCATG CCCTGACCCG CGCCATCGGC GCCAGCGAGA CCCTGCAGCT GGACATCCTC
GAACTCGACG TGCTGCCCGG CGACGTCTTC CTGCTGTGCA GCGACGGCCT CTACCAGGGC
GTTTCCGCCG ACGAGCTGGG CGCCTGCCTC AACCTGCCTT CGCCGCACCT GGCCGTGGAG
CGCCTGTTCC AGCGCGTGCT CGACGGCCCG GCCCGTGACA ACCTCAGCGC CGTGGTGATC
CGCCAATGA
|
|---|
| Protein sequence | MPAVVNAWRS AARTDTGKVR ARNEDAFLAL PEQGLWVVAD GMGGHQNGAL ASRLIVEQLA
ELAQGSLEQR LVELRQALHR LNHRLGQELT VTADRPDTVI GSTVVALLLD GDRAACVWAG
DSRCYLWRGA RLYQLSRDHS LVQQLIDEQG LTPQEAARHP AAHALTRAIG ASETLQLDIL
ELDVLPGDVF LLCSDGLYQG VSADELGACL NLPSPHLAVE RLFQRVLDGP ARDNLSAVVI
RQ
|
|---|
| |