Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0097 |
Symbol | |
ID | 5106282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 92959 |
End bp | 95559 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640501313 |
Product | ATPase |
Protein accession | YP_001185603 |
Protein GI | 146305138 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACG TCGACCTGCA ACAACTGGTT CAAGCTCTGG ACGCCGCGAG CAAGCGCGAC CTGGAGATGG CCGCCGAACG CTGCGTGGTA CGCGGCGGCA ACAAGATCCT CGTCGAGGAC CTGCTGCTGG GTCTGCTCGA GCGCCCGGAA AGCCTGCTGG CGCGTGCCCT GCAGGATGCC GAGATCGATG CCGGCGAGCT GGCCCAGGCG CTGCAGCCGC GCGGCGAGCA CAGCGAGTCG CGCAACCCGG TGTTTTCTGC CGAACTGGTG CAGTGGCTGC AGGACGCCCT GCTGGTGGCC AACCTGGAGC TGGGCGCCAG CCAGATCGAC CAGGCCGCGC TGATCCTCGC CCTGCTGCGC AACCCCATGC GCTACGCCGG CAGCCGTTAT CAGACGCTGC TGAGCAAGCT CAATGCCGAG CGTCTGCGCG ACTTCGCCCT TAGCCAGCAG CCGCAGGCCG CGGGCGGCAA AGCGGCGGCG CCGGGCGAGT CGAACCTGGC GCGCTTTACC CACAACTTCA CCCAGCAGGC CCGCGACGGC AAGCTCGATC CGGTGCTGTG CCGCGACGGC GCGATCCGCC AGATGGTCGA TATCCTCGCC CGCCGGCGCA AGAACAACCC CATCGTGGTC GGCGAGGCCG GGGTGGGCAA GACCGCCATC GTCGAGGGCC TGGCCCTGCG CATCGCCACC GGCGAGGTAC CGCAGGTGCT CAAGGGCGTC GAGCTGCTGT GCCTGGACCT CGGCCTGCTG CAGGCCGGCG CCAGCGTCAA GGGCGAGTTC GAGCGCCGCT TGCAGGGCGT GATCGACGAG GTCAAGGCCT CGCCCAAGCC GATCATCCTG TTTATCGACG AGGCCCATAC GCTGATCGGG GCCGGTGGCC AGGCCGGCAG CGGCGATGCC GCCAACCTGC TCAAGCCGGC GCTGGCCCGT GGCGAGCTGC GCACCATCGC CGCCACCACC TGGAGCGAAT ACAAGAAGTA CTTCGAGAAG GACCCGGCGC TGGCCCGTCG CTTCCAGCCG GTGCAACTGC ACGAGCCGAC CGTCGACGAG GCGGTGACCA TCCTGCGCGG CCTGGCGCCG GTGTACGAGA AGAGCCACGG CATCTACCTG CGCGACGACG CCGTGGTCGC CGCCGCCGAG CTGTCGGCGC GCTACCTGGC CGGTCGCCAG TTGCCGGACA AGGCGGTGGA CGTACTCGAC ACCGCCTGCG CCCGCGTGCG CATCAGCCTG GCCGCCGCAC CCGAGGCGCT GGAGCGCCTG CGCGGCGAGA TCGCCGAGGG CGAGCGCCAG GGCGAGGCCA TGCGCCGCGA CCTGGACGCT GGCCTGAGCA TCGACGGCGA AGCGCTGGAT GCCCTGGAAA CCCGCCTGGT CGCCGCGCGC GCCGAACTGG AGCAGGTGGA AACCCGCTGG GCGATCCAGC GCGACCTGGC CGAGCGCCTG CTCGAGCAGC GCAAGCAGTG CGCCGCGGCG CGTCTTGCTG GCGACGCAGA GGAAACCGAC GAGCCACGTG CCAGCCTGGA GGAACTGGAA GCCGAGCTGC GCGCCCTCCA GGCCGAGCTG GCCGCGGCTC AGGCCAGCGA GCGCCTGGTC AGCTTCGAGG TCTGCCCGCG CCTGGTGGCC GAGGTGATCA GCCACTGGAC CGGCGTGCCG CTGAGCCAGC TGGCGCGCGA GCACAACACC AAGGTCATCA CCTTCGCCGA CGACCTGCGC CAGCGCGTGC GCGGCCAGGA GCAGGCGATC CAGGCGCTGG ACAAGGCCAT GCGCGCCACC GCTGCCGGCC TCAACCGGCC CGATGCGCCA GTGGGCGTGT TCCTCCTGGT CGGCCCCAGC GGCGTCGGCA AGACCGAGAC CGCCCTGGCC CTGGCCGACC TGCTGTATGG CGGTGAACGC TTCCTCACCG TGATCAACAT GTCCGAGTTC CAGGAAAAAC ATACCGTCTC GCGTCTGATC GGCGCGCCGC CCGGCTACGT CGGCTACGGC GAAGGCGGCA TGCTCACCGA AGCCGTGCGG CAGAAGCCCT ACTCGGTGAT CCTCCTCGAC GAGGTGGAGA AGGCCGACCC CGACGTGATG AACGTCTTCT ACCAGATCTT CGACAAGGGC GTGGCCAACG ACGGCGAAGG GCGCGAGATC AACTTCCGCA ACACCCTGAT CCTGATGACC AGCAACCTGG CCAGCGAACG CATCGCCAGC CTGTGCGCCG GTGGTGAGCG CCCGGGGGCC GAGGACCTGG AGCTGGCCAT CCGCCCGCAA CTGACCCAGC ACTTCAAGCC GGCCCTGCTC GGCCGTATGC GCGTGGTGCC CTACTACCCC ATGGACGGCG ACCTGCTGCG CCAGCTGGTC GGCCTCAAGC TGGCCCGTTT CGGCGAGCGC CTGGCCCGTC GCCAGCTCGC CTTCAGCCAC TGCGACGGCC TGGTCGAGCA CCTGGCCGAG CGCTGTACCC ATGGCGACAG CGGCGCCCGT CTGATCGACC ACCTGATCGA CCAGCACCTG CAGCCGCTGG TGGTCGACCG CCTGCTCGAC GCCATGGCGA GCGGCGAGAC CTTGCAGCAG GTACGCGCCA CCCTGAACGG TGAAGGAACG GTGGTCTGTG AGTTCGCTTA A
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Protein sequence | MINVDLQQLV QALDAASKRD LEMAAERCVV RGGNKILVED LLLGLLERPE SLLARALQDA EIDAGELAQA LQPRGEHSES RNPVFSAELV QWLQDALLVA NLELGASQID QAALILALLR NPMRYAGSRY QTLLSKLNAE RLRDFALSQQ PQAAGGKAAA PGESNLARFT HNFTQQARDG KLDPVLCRDG AIRQMVDILA RRRKNNPIVV GEAGVGKTAI VEGLALRIAT GEVPQVLKGV ELLCLDLGLL QAGASVKGEF ERRLQGVIDE VKASPKPIIL FIDEAHTLIG AGGQAGSGDA ANLLKPALAR GELRTIAATT WSEYKKYFEK DPALARRFQP VQLHEPTVDE AVTILRGLAP VYEKSHGIYL RDDAVVAAAE LSARYLAGRQ LPDKAVDVLD TACARVRISL AAAPEALERL RGEIAEGERQ GEAMRRDLDA GLSIDGEALD ALETRLVAAR AELEQVETRW AIQRDLAERL LEQRKQCAAA RLAGDAEETD EPRASLEELE AELRALQAEL AAAQASERLV SFEVCPRLVA EVISHWTGVP LSQLAREHNT KVITFADDLR QRVRGQEQAI QALDKAMRAT AAGLNRPDAP VGVFLLVGPS GVGKTETALA LADLLYGGER FLTVINMSEF QEKHTVSRLI GAPPGYVGYG EGGMLTEAVR QKPYSVILLD EVEKADPDVM NVFYQIFDKG VANDGEGREI NFRNTLILMT SNLASERIAS LCAGGERPGA EDLELAIRPQ LTQHFKPALL GRMRVVPYYP MDGDLLRQLV GLKLARFGER LARRQLAFSH CDGLVEHLAE RCTHGDSGAR LIDHLIDQHL QPLVVDRLLD AMASGETLQQ VRATLNGEGT VVCEFA
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