| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0096 |
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| Symbol | |
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| ID | 5106281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 91940 |
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| End bp | 92947 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501312 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185602 |
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| Protein GI | 146305137 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA CGCATGGGGC AGCAGCCCCT GCTCTGAACC GGCTCAGCCG GGGCATCCGC
GAGTACAGCC TGTTCCAGGC CGTACAGCTG GTGCTGGAGC GCCTCAAGGT TGCCCATCCG
CAACTGGATG ACGAGCGCCT CTACGAGTAC CTGGAATTCC AGGCCAACCC GAGCCTGGGT
TTCCCCGGCA GCGATATCGA TCGCGTGCAG TTCTTCGAGG AGCACGGCGA GCTGCGCGCG
CGCATGCGCG TCAACCTGGT CGGCCTGTTC GGCGGCGGCT CGCCGTTGCC GGCCTTCTAC
AGCGAACAGG CCCTGGGTGA CAGCGAGGAC GGCAACCCGA CCCGCGACTT CCTCGACCTG
TTCAACAACC GTCTGCAGCG CCTGTTGCTG CCGATCTGGC AGAAGTACCG CTACCGCGCC
AGCTTCCAGA GCGGGGCGAT GGACGCCTTC TCCGCGCACC TGTTCGCCCT GATCGGCCTG
GGCAGCGAGC AGATCCGCCA GGCCCAGGAG CTGAACTGGA AGCGCCTGCT GCCCTACCTC
GGCCTGCTCA GCCTGCGTGC CCACTCGGCA GCGCTGATCG AGTCGGTGCT GCGTTACTAC
TTCAAGCACG CCGAGCTGTT CATCGAGCAG TGTCTGGAGC GCCAGGTGGT GGTGCTGGAA
GAGCAGCGCA ACCGCCTCGG CCGCGCCAAC AGCCTGCTCG GCGAAGACAC CGTGCTCGGC
GAGCGCGTCC GCGACCGCGG CGGCAAGTTC CGCATCCACG TGCGCCAGCT GGGCTGGACG
CGCTTTCACG AGTTCCTGCC GATCGGCACG GGTTACCAGC CGCTCTGCGC GCTGGTGCGC
TTCACCCTGC GCGATCCGCT GGACTACGAC ATCCGCCTGG AGCTGCGTCA GGACGAAATC
CGCGACCTGC GCATCGGCGA AGGCAACCCC TGCCTGCTGG GCTGGACCAC CTGGCTCGGC
CGTGAGAACG CCGACGGTCT GGTCACCCTC GGCAGCAAGA TTCATTAA
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| Protein sequence | MDATHGAAAP ALNRLSRGIR EYSLFQAVQL VLERLKVAHP QLDDERLYEY LEFQANPSLG
FPGSDIDRVQ FFEEHGELRA RMRVNLVGLF GGGSPLPAFY SEQALGDSED GNPTRDFLDL
FNNRLQRLLL PIWQKYRYRA SFQSGAMDAF SAHLFALIGL GSEQIRQAQE LNWKRLLPYL
GLLSLRAHSA ALIESVLRYY FKHAELFIEQ CLERQVVVLE EQRNRLGRAN SLLGEDTVLG
ERVRDRGGKF RIHVRQLGWT RFHEFLPIGT GYQPLCALVR FTLRDPLDYD IRLELRQDEI
RDLRIGEGNP CLLGWTTWLG RENADGLVTL GSKIH
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