Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0091 |
Symbol | |
ID | 5106276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 86428 |
End bp | 87906 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640501307 |
Product | hypothetical protein |
Protein accession | YP_001185597 |
Protein GI | 146305132 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA CTAGCGCAGC CGTAGAAAGC AGCCACAGCG CCGCCGAACT CGGCATTCTC GACCGCATCA TCGCCGAGAC CAAACTGACC CCCGATGACG AGGCCTACGA CATCGCCAAG CGCGGCGTAT CGGCCTTCAT CGAAGAGCTG CTCAAGCCGC AGAACGAAAA CGAGCCGGTG AAGAAGGCCA TGGTCGACCG CATGATCGCG GAGATCGACG CCAAGCTCAG CCGGCAGATG GACGAGATCC TCCACCACCC GGACTTCCAG GCCCTGGAAT CCTCCTGGCG CGGTCTCAAG CTGCTGGTGG ACCGCACCAA CTTCCGCGAG AACATCAAGC TGGAGATCCT CAACGCCTCC AAGCAGGACC TGCTCGATGA CTTCGAAGAC AGCCCGGAAA TCGTTCAGTC CGGCCTGTAC AAGCACATCT ACACCGCCGA GTACGGCCAG TTCGGTGGCC AGCCGGTCGG CGCCCTGATC GCCAACTACT ACTTCGACCC GAGCGCTCCG GACGTCAAGA CCCTGCAGTA CGTCGCCTCG GTGGCCTGCA TGTCCCACGC CCCGTTCATC GCCTCGGCCG GCCCGAAATT CTTCGGCCTG GAAACCTTCA CCGGCCTGCC GGACCTGAAG GACCTCAAGG ACCACTTCGA AGGCCCGCAA TTCACCAAGT GGCAGAGCTT CCGCGAGCAG GAAGACGCCC GCTACGTCGG CCTGACTGTA CCGCGCTTCC TGCTGCGCAA CCCGTACGAT CCGGAAGACA ACCCGGTGAA GACCTTCGTC TACAAGGAAA ACGTGGCCAA CAGCCACGAG CACTACCTGT GGGGCAACAC CGCCTACGCC TTCGCCAGCC GTCTGACCGA CAGCTTCGCC AAGTTCCGCT GGTGCCCGAA TATCATCGGC CCGCAGAGCG GTGGCGCGGT GGAAGACCTG CCGCTGCACC ACTTCGAGAG CATGGGCGAG ATCGAGACCA AGATCCCCAC CGAGGTGCTG GTTTCCGACC GTCGCGAATA TGAACTTGCG GAAGAGGGCT TTATCGCCCT GACCATGCGC AAGGGCAGCG ACAACGCCGC GTTCTTCTCC GCCAACTCGG CGCAGAAGCC GAAGTTCTTC GGCATCAGCG AAGAAGGCAA GACCGCCGAG CTGAACTACA AGCTGGGCAC CCAGCTGCCG TACATGTTCA TCGTCAACCG CCTGGCCCAC TACCTGAAAG TGCTGCAGCG CGAGCAGATC GGCGCCTGGA AGGAGCGTAC CGACCTCGAG CTGGAACTGA ACAAGTGGAT CCGCCAGTAC GTGGCCGACC AGGAGAACCC CAGCTCCGAA GTGCGTAGCC GCCGTCCGCT GCGCGCCGCC CAGGTCATCG TCAGCGATGT CGAAGGCGAG CCGGGCTGGT ACCGCGTCAG CCTGAACGTG CGCCCGCACT TCAAGTACAT GGGTGCCGAT TTCACCCTGT CGCTGGTCGG CAAGCTGGAC AAGGAATAA
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Protein sequence | MSTTSAAVES SHSAAELGIL DRIIAETKLT PDDEAYDIAK RGVSAFIEEL LKPQNENEPV KKAMVDRMIA EIDAKLSRQM DEILHHPDFQ ALESSWRGLK LLVDRTNFRE NIKLEILNAS KQDLLDDFED SPEIVQSGLY KHIYTAEYGQ FGGQPVGALI ANYYFDPSAP DVKTLQYVAS VACMSHAPFI ASAGPKFFGL ETFTGLPDLK DLKDHFEGPQ FTKWQSFREQ EDARYVGLTV PRFLLRNPYD PEDNPVKTFV YKENVANSHE HYLWGNTAYA FASRLTDSFA KFRWCPNIIG PQSGGAVEDL PLHHFESMGE IETKIPTEVL VSDRREYELA EEGFIALTMR KGSDNAAFFS ANSAQKPKFF GISEEGKTAE LNYKLGTQLP YMFIVNRLAH YLKVLQREQI GAWKERTDLE LELNKWIRQY VADQENPSSE VRSRRPLRAA QVIVSDVEGE PGWYRVSLNV RPHFKYMGAD FTLSLVGKLD KE
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