| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0090 |
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| Symbol | |
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| ID | 5106275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 85896 |
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| End bp | 86402 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640501306 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185596 |
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| Protein GI | 146305131 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG AAGGCTCGGT AGCCCCCAAG GAACGCATCA ACGTCACCTT CAAACCCGCC
ACCGGCGGCG CCCAGGAAGA AATCGAACTG CCCCTGAAGC TCATGGTGCT CGGCGATTTC
ACCCAGCGTG CCGACGATCG CAAGATCGAA GACCGCAAGC CCATCAGCAT CGACAAGAAC
AGCTTCGACG AAGTGCTGGC CAAGCAGGAA CTGAACCTGA CCTTCGCCGT GCCGAACCGT
CTGCAGGACG AGCAGACCGA TGACGAGCTG GCCGTGCAGC TGCGCATCAA CTCCATGAAG
GACTTCAACC CCGCCAACCT GGTCGAGCAG GTACCGGAGC TGAAGAAGCT GATGGAACTG
CGCGACGCCC TGGTCGCCCT CAAAGGCCCG CTGGGCAACG CCCCGGCCTT CCGCAAGGCG
ATCGAAAGCG TGCTCTCCGA CGACGACTCG CGCGATCGCG TGCTCGGCGA ACTGGGCCTG
GCCGCCAAAG ACAAGCTGGA TTCCTGA
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| Protein sequence | MAKEGSVAPK ERINVTFKPA TGGAQEEIEL PLKLMVLGDF TQRADDRKIE DRKPISIDKN
SFDEVLAKQE LNLTFAVPNR LQDEQTDDEL AVQLRINSMK DFNPANLVEQ VPELKKLMEL
RDALVALKGP LGNAPAFRKA IESVLSDDDS RDRVLGELGL AAKDKLDS
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