| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0088 |
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| Symbol | |
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| ID | 5106273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 82941 |
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| End bp | 83843 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501304 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_001185594 |
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| Protein GI | 146305129 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA CCCAAGTCGA ACGTGTGGAA CTGGATCAAC TGATCTGCTG GCGCATTCGC
ACCCAGCGCA GCGAGCTGCT GGTGGCCCAG CAGGGCGCGC AGATACTCGC CTACCAGCGC
GACGGCCAGC CGCCGCTGAT CTGGCTCAGC CCCGAGGCCG CCTATCAGCG CGCGCAGAGC
GTGCGTGGCG GGGTGCCGAT CTGCTGGCCC TGGTTCGGCG ACCTGCGGCG CAATCCCCAG
GCGGTGCAGG CGCACTACCA GCAGGTCGAA GCGCCTGCCC ATGGTCTGGT GCGCGGGCTG
GACTGGCAGC TGCTGGGCAT CGACGAGGAG GGCGAGCAGG TGACGCTGCG GTTCGCCTTC
GATACGCAGA GGGAGCCGCT GGCGGGCTGG CCGCATGCGG CACTCCTGCA GTTCGAGATT
CGTCTGGCGG ACGATCTGGC CATGAGCCTG CAGACCCACA ACCGTGGGGA AGCGCCCTTG
ACCCTGAGCC AGGCCCTGCA TACCTACTTC GCCGTCAGCG ACGTGCGCCA GGTCAGCGTC
GATGGCCTGC AGGGCTGCCG CTACGTCGAC ACGCTGCAGG ACTGGCGAGA GCTGCGGCAG
GATGCCGAAT TGCGCTTCGT CGGCGAGACC GACCGCATTT ATATGGACAC GCCGGCCCGC
CTGAGCATCG TCGATCCGGG CTGGGGGCGG CGCATTCACC TCGATTGCAG CGGCTCGCGC
TCGGCCGTGC TGTGGAATCC CTGGGTGGAC AAGGCCAGGC GCCTTTCACA GTTCCCGGAT
GACGCCTGGC AAAACATGCT GTGCATCGAG ACCGCCAACC TGCTGGAGGA TGTGGTGCAG
GTGAAACCCG ACGAATGGCA CCGCCTCGAT CTGCGGCTTT CCAGCGACTC GTTCGGGCAC
TGA
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| Protein sequence | MSNTQVERVE LDQLICWRIR TQRSELLVAQ QGAQILAYQR DGQPPLIWLS PEAAYQRAQS
VRGGVPICWP WFGDLRRNPQ AVQAHYQQVE APAHGLVRGL DWQLLGIDEE GEQVTLRFAF
DTQREPLAGW PHAALLQFEI RLADDLAMSL QTHNRGEAPL TLSQALHTYF AVSDVRQVSV
DGLQGCRYVD TLQDWRELRQ DAELRFVGET DRIYMDTPAR LSIVDPGWGR RIHLDCSGSR
SAVLWNPWVD KARRLSQFPD DAWQNMLCIE TANLLEDVVQ VKPDEWHRLD LRLSSDSFGH
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