| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0082 |
|---|
| Symbol | |
|---|
| ID | 5106267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 76571 |
|---|
| End bp | 76972 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640501298 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001185588 |
|---|
| Protein GI | 146305123 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACT ACGAACAGGA AGATCCGATC CCTCAGGGTG ACCTCGCCCT GCAGATCACT
GCGCTGCCGC GCGAGACCAA TGGTTTCGGT GATATCTACG GTGGCTGGCT GGTTTCGCAG
ATGGACCTCG CCGGTACCGC CATGGCGAGC AAGGTCGCAG GGGGCCGCGT AGCGACCGTG
GCCATCGATC GCATGGCCTT TCTGGTGCCG GTGGCGGTGG GTGCGCAGTT GTCCTTCTAC
ACCCAGGCCC TGGAAGTGGG GCGCAGCTCG ATCCAGATGA TGGTCGAGGT GTGGAGCGAC
GATCCGTTGT CCAACGAATG GCGCAAGGTC ACCGAGGCGG TGTTCGTCTT TGTCGCCATC
GACGGCAGCG GCCGTACCCG CCCGGTACCG GCACGCCGCT GA
|
|---|
| Protein sequence | MNDYEQEDPI PQGDLALQIT ALPRETNGFG DIYGGWLVSQ MDLAGTAMAS KVAGGRVATV
AIDRMAFLVP VAVGAQLSFY TQALEVGRSS IQMMVEVWSD DPLSNEWRKV TEAVFVFVAI
DGSGRTRPVP ARR
|
|---|
| |