| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0071 |
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| Symbol | |
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| ID | 5106256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 68382 |
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| End bp | 69617 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501287 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001185577 |
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| Protein GI | 146305112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCA TGCCTGGTTC ACAGAATTCT TTCCGCACCG GCCCCGACGC TCGCGGCCTG
TTCGGCCGCT TCGGCGGTCA GTTCGTCGCC GAAACCCTGA TGCCGCTGAT CAACTCGCTG
GCCGCCGAAT ACGAAAAGGC CAAGAGCGAT CCGGCCTTCC TCGAAGAACT GGCCTACTTC
CAGCGCGACT ACATCGGTCG CGCCAGCCCG CTTTACTACG CCGAGCGCCT GAGCCAGCAC
TTCGGCGGCG CGAAGATCTA CCTCAAGCGC GAAGACCTGA ACCACACCGG CGCGCACAAG
ATCAACAACT GCATCGGCCA GATCCTCCTG GCCAAGCGCA TGGGCAAGCA GCGCATCATC
GCCGAGACCG GCGCCGGCAT GCACGGCGTG GCCACCGCCA CCGTGGCCGC GCGCTTCGGC
ATGCAGTGCG TGGTGTACAT GGGCACCACC GACATCGACC GCCAGCAGGC CAACGTCTTT
CGCATGAAGC TGCTCGGCGC CGAGGTAATT CCGGTCACCG CCGGCACCGG CACCCTCAAG
GACGCCATGA ACGAGGCCCT GCGCGACTGG GTGACCAACG TCCACAACAC CTTCTACCTG
ATCGGCACCG CCGCCGGCCC GCACCCGTAC CCGGCCATGG TCCGCGACTT CCAGTCGGTG
ATCGGCAACG AAGTGCGTGA GCAGATCCTG GCGAAGGAAG GGCGTCTGCC CGACTCGCTG
GTGGCCTGCA TCGGTGGTGG CTCCAACGCC ATCGGCCTGT TCCACCCCTT CCTCGATGAT
GAAGGCGTGC AGATCATCGG CGTCGAGGCG GCCGGCCACG GCATCGACAC CGGCAAGCAT
GCGGCGAGCA TGGCCGGCGG CGCGCCGGGC GTGCTGCACG GCAACCGCAC CTTCCTGCTG
CAGGACGAGG ACGGCCAGAT CACCGATGCC CACTCGATTT CCGCCGGCCT CGATTACCCC
GGCGTCGGCC CGGAACACGC CTGGTTGCAC GAGATCAAGC GCGTCGAATA CGTGCCGATC
AGCGATGACG AAGCCCTCGA AGCCTTCCAC CACTGCTGCC GCCTGGAAGG CATCATCCCG
GCCCTGGAAA GCGCTCATGC GCTGGCCGAA GCCTTCAAGC GTGCGCCGAA ACTGCCCAAG
GATCACCTGA TGGTGATCAA CCTGTCCGGT CGTGGCGACA AGGACATGCA GACCGTGATG
CACCACATGC AGGACAACCA GGAGAAACAC GCATGA
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| Protein sequence | MTAMPGSQNS FRTGPDARGL FGRFGGQFVA ETLMPLINSL AAEYEKAKSD PAFLEELAYF
QRDYIGRASP LYYAERLSQH FGGAKIYLKR EDLNHTGAHK INNCIGQILL AKRMGKQRII
AETGAGMHGV ATATVAARFG MQCVVYMGTT DIDRQQANVF RMKLLGAEVI PVTAGTGTLK
DAMNEALRDW VTNVHNTFYL IGTAAGPHPY PAMVRDFQSV IGNEVREQIL AKEGRLPDSL
VACIGGGSNA IGLFHPFLDD EGVQIIGVEA AGHGIDTGKH AASMAGGAPG VLHGNRTFLL
QDEDGQITDA HSISAGLDYP GVGPEHAWLH EIKRVEYVPI SDDEALEAFH HCCRLEGIIP
ALESAHALAE AFKRAPKLPK DHLMVINLSG RGDKDMQTVM HHMQDNQEKH A
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