| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0070 |
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| Symbol | trpA |
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| ID | 5106255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 67576 |
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| End bp | 68385 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501286 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001185576 |
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| Protein GI | 146305111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC TGCAGAACCG TTTCGCCGAA CTGAAAGCGG AAAACCGCGC CGCGCTGGTG
ACCTTCGTCA CCGCCGGTGA TCCCGACTAC GCCACCTCGC TGAGCATTCT CAAGGGCCTG
CCGGAGGCCG GCGCCGACGT GATCGAGCTG GGCATGCCCT TCACCGACCC GATGGCCGAC
GGCCCGGCCA TCCAGCTCGC CAACATCCGC GCACTGGCCG GCAAGCAGGG CATGCAGCAG
ACGCTGCAGA TGGTTCGCGA ATTCCGCGCC GGCAACCAGA GCACGCCGCT GGTGCTGATG
GGCTACTACA ACCCGATCTT CGTCTACGGC GTCGAGCGCT TCATCAGCGA CGCCAAAGAG
GCCGGCGTCG ACGGCCTGAT CGTGGTCGAC CTGCCGCCGG AGCACAACGA CGAGCTGTGC
GAACCGGCGC AGAGCGCAGG TCTGGATTTC ATCCGCCTGA CTACCCCGAC CACCGACGAC
GACCGCCTGC CCACCGTGCT GGCCGGCAGC TCCGGCTTCG TCTACTACGT GTCGGTGGCC
GGTGTCACCG GCGCCGGTGC GGCGACCCTG GATCATGTCG AGGAAGCCGT GGCGCGCCTG
CGTCGCCACA CCGACCTGCC CGTTTGCATC GGCTTCGGCA TCCGCACCCC GGAGCACGCC
GCCGAAGTGG CCAAGCGCGC CGAGGGCGCG GTGGTCGGCT CGGCGCTGAT CGACAAGATC
GCCGAGGCGA AGAGCCCGCA GCAGGCCATC GACGGCGTAC TCGGCCTGTG CCGCGAACTG
GCCGAAGGGG TACGCGGCGC GCGCCGCTGA
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| Protein sequence | MSRLQNRFAE LKAENRAALV TFVTAGDPDY ATSLSILKGL PEAGADVIEL GMPFTDPMAD
GPAIQLANIR ALAGKQGMQQ TLQMVREFRA GNQSTPLVLM GYYNPIFVYG VERFISDAKE
AGVDGLIVVD LPPEHNDELC EPAQSAGLDF IRLTTPTTDD DRLPTVLAGS SGFVYYVSVA
GVTGAGAATL DHVEEAVARL RRHTDLPVCI GFGIRTPEHA AEVAKRAEGA VVGSALIDKI
AEAKSPQQAI DGVLGLCREL AEGVRGARR
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