| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0065 |
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| Symbol | |
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| ID | 5106250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 62616 |
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| End bp | 63569 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501281 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001185571 |
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| Protein GI | 146305106 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAG TGCTCGATGA GATTTCCCTG GACAGCCTGC GGGTGTTCGA ATCGGCCGCC
CGCCTGCTGA GCTTCACCGC GGCGGCCAAC GAGCAGGGCA GCAGCCAGCC GGCCATCAGC
CAGCAGATCA AACGCCTGGA ACAGCAGCTG GCGGTACGCC TGTTCGACCG CGTGCATCGC
GGATTGGTGC TGACGGAAGC GGGCGAACTG TTGCTGCGTT ACGTGCAGGA GGGCCTGCAC
AGCCTGGACA GCGGCCTGCA GGCGGTGGTC GCGCGGCAGC AGCATGAGGT GCTGCAGGTG
GCCACCGATT TCGCCTTCGC CGCCTACTGG CTGATGCCGC GTCTGCAGCG CTTCCATCAG
CTGCACCCGG AGGTGGACGT GAGCCTGGTG ACCACCGAGC GCGACTTGGG CGGCAACCTG
CCGGGCGAGA TCGACGTGGC CATCAGTTTC GGCGACGGTC GCTGCAAGCA CGGCGAGAGC
CTGCTGCTGT TCGGCGAGGA AGTGTTCCCG GTGTGCAGTC CGCACCTGCT GCACGGCCGC
GAGCCGGTGG ACTCGGCGGC ATTGTTGGCG CGCCTGCCAC TGCTGCATCT GCGCCCGGAG
GCGCGCGCCA ACTGGTTTGC CTGGGATGGC GTATTCCGCG CGCTGGGCAT TGCCGAGCCC
CCTTCTGCCG GCGCCCTGCG CTTCGACAAC TACACCTTGC TGATCCAGGC CGCCATCGCC
GGCCAGGGCG TGGCCATCGG CTGGCGCTAC CTGGTGGACG AGCTGTTGGC CCAGGGGCTG
CTGGTGCGCA TGCTGGACAC CTCGATCCGC TCGGCCTATG GCTATTACGT GGTGATGCCC
GAGCGCAAGC GGCGTGCGCG GCTGGTGCGC TGCTTCGTCG ACTGGCTGCA GGACGAGCTG
GCCAGCCTGC AGCGGCAGCC GCCGCAAGGT GGTTGGGCGG GTGTCGCGAT CTAG
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| Protein sequence | MRKVLDEISL DSLRVFESAA RLLSFTAAAN EQGSSQPAIS QQIKRLEQQL AVRLFDRVHR
GLVLTEAGEL LLRYVQEGLH SLDSGLQAVV ARQQHEVLQV ATDFAFAAYW LMPRLQRFHQ
LHPEVDVSLV TTERDLGGNL PGEIDVAISF GDGRCKHGES LLLFGEEVFP VCSPHLLHGR
EPVDSAALLA RLPLLHLRPE ARANWFAWDG VFRALGIAEP PSAGALRFDN YTLLIQAAIA
GQGVAIGWRY LVDELLAQGL LVRMLDTSIR SAYGYYVVMP ERKRRARLVR CFVDWLQDEL
ASLQRQPPQG GWAGVAI
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