| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0051 |
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| Symbol | |
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| ID | 5106725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 47452 |
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| End bp | 47766 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501267 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001185557 |
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| Protein GI | 146305092 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAG AAGCACTGGA AAAGATGCTG GCCAAGGGCA TGGACAACGC CCTGCTGCGC
TTCGGCCTGG GCAAGGCCCA CCTGGATGCC GGCAACGCCG CCCAGGCTGC CGAGCACCTG
CAACGCTGCG TGGAGTTCGA CCCCGGCTAT TCCGCTGCCT GGAAACTGCT GGGCAAGGCG
CTGCAGGCCG AAGGCGACAT CGAGGCAGCG CGCCGGGCCT GGCAGCAGGG CCTCAATGCC
GCCCAGAGCA AGGGCGACAA GCAGGCCGAG AAGGAAATGA GCGTGTTTCT GCGCAAGCTG
GACAAGGTGC GCTGA
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| Protein sequence | MSTEALEKML AKGMDNALLR FGLGKAHLDA GNAAQAAEHL QRCVEFDPGY SAAWKLLGKA
LQAEGDIEAA RRAWQQGLNA AQSKGDKQAE KEMSVFLRKL DKVR
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