| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0047 |
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| Symbol | |
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| ID | 5106721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 44435 |
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| End bp | 44698 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640501263 |
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| Product | HrpO family type III secretion protein |
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| Protein accession | YP_001185553 |
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| Protein GI | 146305088 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGCGT TGGCGCTGTT CAAGCAAGGC ATGTTCCTGG TGGTTATCCT GACTGCACCG
CCATTGGCCG TGGCGGTGCT GGTCGGGGTG ACGACATCGC TGGTACAGGC GCTGATGCAG
ATGCAGGATC AGACGCTGCC GTTCGGTTTG AAACTGGCTG CCGTCGGCCT GACCCTGGCG
ATGACCGGAC GCTGGATCGG CCTGGAGTTG ATTCAGTTCA CCAATATGGC GTTCGACCTG
ATTGCCCGCT CAGGGGGCAA TTAG
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| Protein sequence | MEALALFKQG MFLVVILTAP PLAVAVLVGV TTSLVQALMQ MQDQTLPFGL KLAAVGLTLA
MTGRWIGLEL IQFTNMAFDL IARSGGN
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