| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0036 |
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| Symbol | |
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| ID | 5106934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 33458 |
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| End bp | 35032 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640501252 |
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| Product | transposase IS66 |
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| Protein accession | YP_001185542 |
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| Protein GI | 146305077 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG TGCCCGCCCC CCTTCCTGAC GACCCAATCC TGCTCAAGCA TTTACTGCTG
CTGGCCAGTG AACAGGCGGC TGCGAAAGAT GCTCGCATAG AACAACTTCA GGAACAGGTC
GCCCTGCTGC GCCACAAGTT GTTCTCGCCC AAGTCCGAGC GCAGCCCTGA AGACGCCGAC
TCACCGCAGT TGGCCATGTT CAACGAGGTC GAAGAGCTGA TCGAAGCGGC CGCTGCGCCA
AGCGAAGCCG AAGCCGAAGC CGAAGCCGAA GCCGAAGCCG AAGCCGAAGA AATCGTTGCG
CCGGTCAAGC GCCGTGGCAA GCGCAAGCCG TTGCCGGCCA ACCTGCCGCG TGTCGAAGTC
ATCCACGACC TGCCCGAGCA CGAGCTGACT TGCGCCTGTG GCGCCTGCAA ACAAGTCATC
GGCGAGGAGA CCAGCGAACA GCTGGAGATT ATCCCGATGC AGGTGCGGGT CATCCGCCAT
ATCCGCAAGA CCTACGCCTG CAAGGCCTGC GAAGCGGCGC CGCTCACTGC CGACAAGCCG
GCCCAACTGA TCGAGAAGAG CCTGGCCAGC CCCAGCGTGT TGGCCATGCT GCTGACCACC
AAGTACGCCG ACGGCATCCC GCTGTACCGC TTCGAGAAGA TGCTCAGCCG CCACGGCGTC
GACATACCAC GCCAGACCCT GGCGCGCTGG GTGATCCAGA GCGGTGAACA GCTGCAACCG
CTGCTCAACC TGCTGCGCGA CAAGCTGCTC GAATACCCCG TTTTGCACTG CGACGAAACG
CGCCTGCAGG TGCTGCATGA ACCGGGACGC GATCCCACCG CGCAGTCCTG GATGTGGGTA
CAAAGCGGTG GACCACCGGA TAAGCCGGTG ATCCTCTTCG ACTACACCGC CAGCCGCGCG
CAGGAGGTGC CGCTGCGCTT GCTCGACGGC TATCGCGGCT ACCTGATGAC CGACGACTAC
GCCGGCTACA ACGCCGTGGC CGCGCAAGAA GGCATCGAAC GCCTCGGCTG CTGGGCGCAT
GCGCGGCGCA AGTTCGTCGA GGCGCAGAAA GTGCAACCCA AGGGCAAAAC CGGCCGTGCC
GACATGGCGC TGAACCTGAT CAACAAGCTC TACGGCATCG AGCGTGACCT GAAGGACGCC
TGCGATACCG AGCGCCTGGT CGCCCGTCAG CAACGCAGCC AGCCGCTGCT CGATCAACTC
AAGACCTGGC TGGACAAGAC CCAGCCGCAG GTCGTCGGGC AGACGGCGCT GGGCAGGGCG
GTGAACTACC TGGCCAGCAA CTGGAGAAAG CTGGTGCGCT ACGTCGAAGG TGGACATCTG
CCGATCGACA ACAACCGCGC GGAGAACGCC ATCCGCCCGT TCGTTATCGG GCGCAAGAAC
TGGCTGTTCA GCGACACGCC CAAGGGGGCC ACGGCCAGCG CACAGATCTA CAGCCTGATC
GAAACCGCCA AGGCCAATGG CCAGGAGCCT TACGCCTGGC TGCGCCACAT CCTCGAACGC
CTGCCGGCCG CCAATAGCGT CGAGGATTAC GAAGCGCTGC TGCCGTGGAA TTGCTCGCCA
GTGAGCGCAT CCTGA
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| Protein sequence | MIAVPAPLPD DPILLKHLLL LASEQAAAKD ARIEQLQEQV ALLRHKLFSP KSERSPEDAD
SPQLAMFNEV EELIEAAAAP SEAEAEAEAE AEAEAEEIVA PVKRRGKRKP LPANLPRVEV
IHDLPEHELT CACGACKQVI GEETSEQLEI IPMQVRVIRH IRKTYACKAC EAAPLTADKP
AQLIEKSLAS PSVLAMLLTT KYADGIPLYR FEKMLSRHGV DIPRQTLARW VIQSGEQLQP
LLNLLRDKLL EYPVLHCDET RLQVLHEPGR DPTAQSWMWV QSGGPPDKPV ILFDYTASRA
QEVPLRLLDG YRGYLMTDDY AGYNAVAAQE GIERLGCWAH ARRKFVEAQK VQPKGKTGRA
DMALNLINKL YGIERDLKDA CDTERLVARQ QRSQPLLDQL KTWLDKTQPQ VVGQTALGRA
VNYLASNWRK LVRYVEGGHL PIDNNRAENA IRPFVIGRKN WLFSDTPKGA TASAQIYSLI
ETAKANGQEP YAWLRHILER LPAANSVEDY EALLPWNCSP VSAS
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