| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0035 |
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| Symbol | |
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| ID | 5106710 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 33299 |
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| End bp | 35920 |
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| Gene Length | 2622 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 62% |
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| IMG OID | 640726202 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGCGA ATGCAGCCAT TTCTATCCGC CAACCTTCCG CTATCCGCCA GCTCAACAGC
GAACAGTTGA AGATGCTCCG CGCCTTCATT CAGAAACGCG TGATGAACCC GGACGATGCC
GACGACATCC TGCAGGGCAC CTTCGTCGAA GCACTGCGCA ACGAGCACAA GTTCCAGCAC
GCCAGCAAGC CGCAGACGTG GCTGTGCGGT ATTGCCCTGA ATCTGATTCG CAACCATTTC
CGGCGCCTGT ACAGCCAGCC TTATCAGGAA GCCTGGGAGG ACCAATGGCA TCTGGAAAAC
GAACATGCCG ACGACATTGG CCAGCAAGTC GACGGACACC GGCAACTGGC CCGTGTCGTC
AGTGCGATCA GCGACCTGCC GAACAATATG CAACGGGTGA TCGAAGTCAG CCTGGCCATG
GACGGTAGGT ATCCGCTCCA TAAACCCCAC CTGCCCATAG CCCGCAGATC ATTGGAAGCT
GAACTCCCGT TTTCACCGGA GTTCATCCCA TGATGCGTCC CGACGCCAAG GTGCAGAAGG
TCTACCTCTA CCCAAAACCC GTCGATTTCC GCAAATCCAT CAACGGCCTG GCCGCTCTGG
TCGAGCTGGA CATCAAGGTG GAAGTGTTCA ACCCCGTGCT GTTCGTGTTC CTCAACCGCA
CCCGCAGTCA GGTCAAGATC CTCTACTGGG AGCGCAATGG CTTCTGCCTG TGGCTCAAGC
GTTTGGAAGC CGAACGCTTC AAGACCAAGC CCGATGCCGG CGACGAGGCC ATCGAGCTGA
CGGTCGATGA GTTGAACTGG CTGCTCGACG GCATCGACCT GTGGCGCAAC CGTCCGCACC
AGATACTGAC GCCGCGTTTC GTGACCTGAG CCGGTATAAT CCACGGCCAT GATCGCCGTG
CCCGCCCCCC TTCCTGACGA CCCAATCCTG CTCAAGCATT TACTGCTGCT GGCCAGTGAA
CAGGCGGCTG CGAAAGATGC TCGCATAGAA CAACTTCAGG AACAGGTCGC CCTGCTGCGC
CACAAGTTGT TCTCGCCCAA GTCCGAGCGC AGCCCTGAAG ACGCCGACTC ACCGCAGTTG
GCCATGTTCA ACGAGGTCGA AGAGCTGATC GAAGCGGCCG CTGCGCCAAG CGAAGCCGAA
GCCGAAGCCG AAGCCGAAGC CGAAGCCGAA GCCGAAGAAA TCGTTGCGCC GGTCAAGCGC
CGTGGCAAGC GCAAGCCGTT GCCGGCCAAC CTGCCGCGTG TCGAAGTCAT CCACGACCTG
CCCGAGCACG AGCTGACTTG CGCCTGTGGC GCCTGCAAAC AAGTCATCGG CGAGGAGACC
AGCGAACAGC TGGAGATTAT CCCGATGCAG GTGCGGGTCA TCCGCCATAT CCGCAAGACC
TACGCCTGCA AGGCCTGCGA AGCGGCGCCG CTCACTGCCG ACAAGCCGGC CCAACTGATC
GAGAAGAGCC TGGCCAGCCC CAGCGTGTTG GCCATGCTGC TGACCACCAA GTACGCCGAC
GGCATCCCGC TGTACCGCTT CGAGAAGATG CTCAGCCGCC ACGGCGTCGA CATACCACGC
CAGACCCTGG CGCGCTGGGT GATCCAGAGC GGTGAACAGC TGCAACCGCT GCTCAACCTG
CTGCGCGACA AGCTGCTCGA ATACCCCGTT TTGCACTGCG ACGAAACGCG CCTGCAGGTG
CTGCATGAAC CGGGACGCGA TCCCACCGCG CAGTCCTGGA TGTGGGTACA AAGCGGTGGA
CCACCGGATA AGCCGGTGAT CCTCTTCGAC TACACCGCCA GCCGCGCGCA GGAGGTGCCG
CTGCGCTTGC TCGACGGCTA TCGCGGCTAC CTGATGACCG ACGACTACGC CGGCTACAAC
GCCGTGGCCG CGCAAGAAGG CATCGAACGC CTCGGCTGCT GGGCGCATGC GCGGCGCAAG
TTCGTCGAGG CGCAGAAAGT GCAACCCAAG GGCAAAACCG GCCGTGCCGA CATGGCGCTG
AACCTGATCA ACAAGCTCTA CGGCATCGAG CGTGACCTGA AGGACGCCTG CGATACCGAG
CGCCTGGTCG CCCGTCAGCA ACGCAGCCAG CCGCTGCTCG ATCAACTCAA GACCTGGCTG
GACAAGACCC AGCCGCAGGT CGTCGGGCAG ACGGCGCTGG GCAGGGCGGT GAACTACCTG
GCCAGCAACT GGAGAAAGCT GGTGCGCTAC GTCGAAGGTG GACATCTGCC GATCGACAAC
AACCGCGCGG AGAACGCCAT CCGCCCGTTC GTTATCGGGC GCAAGAACTG GCTGTTCAGC
GACACGCCCA AGGGGGCCAC GGCCAGCGCA CAGATCTACA GCCTGATCGA AACCGCCAAG
GCCAATGGCC AGGAGCCTTA CGCCTGGCTG CGCCACATCC TCGAACGCCT GCCGGCCGCC
AATAGCGTCG AGGATTACGA AGCGCTGCTG CCGTGGAATT GCTCGCCAGT GAGCGCATCC
TGACAGACCC GCCCCATCAG CAGTAGGTGG GGTTTATGGA GCGGTTACGA CGGTAGCTAC
CAGGACACCG CCTCCTCACT GGGCGTCCCG ATTGGCACGG TGCGCTCACG CCTGTCCCGC
GCAAGAGAGC AGTTGAAAAG GCAGATCGAT CCGTTTGCCT GA
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| Protein sequence | |
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