| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0004 |
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| Symbol | gyrB |
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| ID | 5106679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3820 |
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| End bp | 6240 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640501221 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001185511 |
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| Protein GI | 146305046 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA ATCAAACGTA CGACTCCTCC AGCATCAAGG TGCTGAAAGG ACTGGACGCC
GTACGCAAAC GTCCCGGGAT GTACATCGGT GACACTGACG ATGGCAGTGG TCTGCACCAC
ATGGTGTTCG AGGTGGTCGA TAACTCCATC GACGAAGCGC TGGCCGGCTA TTGCAGCGAG
ATCGTCATCA CCATTCACCC TGACGAATCG ATCAGCGTAC GTGACAACGG TCGCGGCATT
CCGGTGGACA TCCACAAGGA AGAAGGCGTT TCCGCGGCCG AGGTCATCAT GACCGTGCTG
CACGCCGGCG GTAAGTTCGA TGACAACACC TACAAGGTGT CCGGCGGTCT GCACGGCGTG
GGTGTATCGG TGGTGAACGC GCTGTCCGAA GAGCTGCGCC TGACCATCCG CCGCGCTGGC
AAGGTGTGGG AGCAGATCTA TCACCACGGC GTGCCGCAAG CGCCGCTGGC TACTGTCGGC
GACACCGATG GCACTGGTAC CGAGATTCAC TTCAAGGCAT CTGCCGAGAC CTTCAGCAAC
ATCCATTTCA GCTGGGATAT CCTGGCCAAG CGCCTGCGCG AGCTGTCGTT CCTCAACTCC
GGCGTGGGCA TCCTGCTGCG TGACGAGCGT TCCGGCAAGG AAGAGCTGTT CAAGTACGAA
GGCGGTCTGA AGGCCTTCGT CGAGTACCTC AACACCAACA AGAACGTGGT GAACCAGGTA
TTCCACTTCA ACATCCAGCG CGAGGAAGAT GGTGTTGGCG TGGAAGTGGC CCTGCAGTGG
AACGACAGCT TCAACGAGAA CATCCTCTGC TTCACCAACA ACATTCCGCA GCGTGACGGT
GGTACCCACC TGGCAGGCTT CCGCTCTGCC CTCACCCGCC ACCTGAACAA CTACATCGAG
CAGGAAGGTC TGGCGAAGAA GTTCAAGGTC GCCACCACTG GCGATGACGC CCGTGAAGGC
CTGACCGCAA TCATCTCGGT CAAGGTGCCG GACCCGAAAT TCAGCTCGCA GACCAAGGAC
AAGCTGGTTT CCAGCGAGGT GAAAACCGCT GTCGAGCAGG AGATGGGCAA GTACTTTGCC
GACTTCCTGC TGGAGAATCC CAACGAAGCC AAGGCCGTGG TCGGCAAGAT GATCGACGCC
GCCCGTGCCC GTGAAGCGGC GCGGAAGGCG CGTGAAATGA CCCGCCGCAA GGGCGCTCTG
GACATTGCCG GTCTGCCCGG CAAACTGGCC GACTGTCAGG AAAAAGACCC GGCGCTGTCC
GAACTCTACA TCGTGGAGGG TGACTCCGCG GGCGGTTCTG CCAAGCAGGG CCGTAACCGC
AAGACCCAGG CGATCCTGCC GCTCAAGGGC AAGATCCTCA ACGTCGAGAA GGCGCGCTTC
GACAAGATGC TCTCCTCTGC CGAAGTCGGT ACCCTGATCA CCGCACTGGG CTGCGGTATC
GGACGCGAGG AGTACAACAT CGACAAGCTG CGCTACCACA ACATCATCAT CATGACCGAT
GCTGACGTTG ACGGTTCGCA CATCCGTACT CTGCTGCTGA CCTTCTTCTT CCGTCAGCTG
CCGGAGCTGA TCGAGCGTGG CTACGTCTAC ATCGCCCAGC CGCCGCTGTA CAAGGTCAAG
AAGGGCAAGC AGGAGCAGTA CATCAAGGAC GACGAGGCCA TGGACGAATA CATGACCCAG
TCGGCCCTGG AAGACGCCAG CCTGCACGTC AACGAGAACG CTCCTGGCCT GTCCGGCGGT
GCTCTGGAGA AGCTGGTTGG TGAATACCGC GGCGTGATGA AGACCCTGGA CCGCCTGTCG
CGCGTGTATC CGAAGGAAAT CACCGAGCAC TTCGTCTACC TGCCGCGCAT CGGCCTTGAA
CAGCTAGCTG ATCATGCCGG CATGCAGGCC TGGCTGGAGC AGTTCAGCGC CCGTCTGAAG
ACGATGGAAA AGTCCGGCCA GACCTACACT GCCAGCCTGC GCGAAGACCG CGAGCGCCAT
GTCTGGCTGC CTGAGGTAGA GGTCAAGGCG CATGGTCTGT CCAGCTACAC CACCTTCAAC
CGCGACTTCT TCGCCAGCAA TGACTACAAG ACAGTCACGG CCCTGGGCGA CCAGCTGAAC
AACCTGCTGG AAGACAGCGC CTACGTACAG CGCGGCGAAC GCAAGAAGCC GGTGGCGACC
TTCAAGGAAG CGCTGGACTG GCTGATGGCC GAGAGCACCA AGCGCCACAG TATCCAGCGC
TATAAGGGTC TCGGCGAAAT GAACCCGGAT CAGCTGTGGG AAACCACCAT GGATCCGGAA
GTGCGACGCA TGCTCAAGGT GACCATCGAA GACGCCATCG CGGCGGACCA GATCTTCAAC
ACCCTGATGG GCGACGCCGT GGAGCCGCGC CGCGACTTCA TCGAGTCCAA TGCCCTGGCG
GTGTCGAATC TGGACTTCTG A
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| Protein sequence | MSENQTYDSS SIKVLKGLDA VRKRPGMYIG DTDDGSGLHH MVFEVVDNSI DEALAGYCSE
IVITIHPDES ISVRDNGRGI PVDIHKEEGV SAAEVIMTVL HAGGKFDDNT YKVSGGLHGV
GVSVVNALSE ELRLTIRRAG KVWEQIYHHG VPQAPLATVG DTDGTGTEIH FKASAETFSN
IHFSWDILAK RLRELSFLNS GVGILLRDER SGKEELFKYE GGLKAFVEYL NTNKNVVNQV
FHFNIQREED GVGVEVALQW NDSFNENILC FTNNIPQRDG GTHLAGFRSA LTRHLNNYIE
QEGLAKKFKV ATTGDDAREG LTAIISVKVP DPKFSSQTKD KLVSSEVKTA VEQEMGKYFA
DFLLENPNEA KAVVGKMIDA ARAREAARKA REMTRRKGAL DIAGLPGKLA DCQEKDPALS
ELYIVEGDSA GGSAKQGRNR KTQAILPLKG KILNVEKARF DKMLSSAEVG TLITALGCGI
GREEYNIDKL RYHNIIIMTD ADVDGSHIRT LLLTFFFRQL PELIERGYVY IAQPPLYKVK
KGKQEQYIKD DEAMDEYMTQ SALEDASLHV NENAPGLSGG ALEKLVGEYR GVMKTLDRLS
RVYPKEITEH FVYLPRIGLE QLADHAGMQA WLEQFSARLK TMEKSGQTYT ASLREDRERH
VWLPEVEVKA HGLSSYTTFN RDFFASNDYK TVTALGDQLN NLLEDSAYVQ RGERKKPVAT
FKEALDWLMA ESTKRHSIQR YKGLGEMNPD QLWETTMDPE VRRMLKVTIE DAIAADQIFN
TLMGDAVEPR RDFIESNALA VSNLDF
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